{"id":"W1989625251","doi":"10.1186/1471-2180-12-269","title":"Effects of the Campylobacter jejuniCJIE1 prophage homologs on adherence and invasion in culture, patient symptoms, and source of infection","year":2012,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Government of Canada","keywords":"Prophage; Biology; Virulence; Microbiology; Campylobacter jejuni; Population; Host adaptation; Pathogen; Genetics; Gene; Bacteria; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002057223,0.0001257736,0.0002591949,0.00001627953,0.00004477988,0.000002823065,0.00008432544,0.0002059796,0.00001189633],"category_scores_gemma":[0.000149202,0.00004222962,0.00004927472,0.0001343144,0.0002236464,0.00003910301,0.0001385543,0.000123513,0.000002463825],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001309348,"about_ca_system_score_gemma":0.00000479268,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004403641,"about_ca_topic_score_gemma":0.0003705116,"domain_scores_codex":[0.9988104,0.0004859046,0.0002452823,0.0002037426,0.0000264618,0.0002282434],"domain_scores_gemma":[0.9992419,0.0004448112,0.0001881687,0.00006169044,0.00002405078,0.00003932147],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0000313273,0.0000675234,0.4971911,0.00002733279,0.000003809573,1.138516e-7,0.0001520162,4.303054e-7,0.4990329,0.00005179685,0.00003500337,0.003406615],"study_design_scores_gemma":[0.0002014209,0.0006547788,0.9174026,0.00005683385,0.00001090747,0.00003540541,0.00003289117,0.000001218994,0.08034883,0.00006519575,0.001108578,0.00008136647],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983184,0.001109316,0.000001751064,0.00002698978,0.000157772,0.0003276047,0.000008273711,0.000008343512,0.00004152235],"genre_scores_gemma":[0.9995569,0.0001598827,0.00002126679,0.0001659661,0.00003267936,0.00001399118,0.00001055226,8.855862e-7,0.00003787591],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4202115,"threshold_uncertainty_score":0.1722074,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0116949111182441,"score_gpt":0.2029749488337013,"score_spread":0.1912800377154573,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}