{"id":"W1989737499","doi":"10.1371/journal.pone.0009162","title":"Transcriptome Profiles of Carcinoma-in-Situ and Invasive Non-Small Cell Lung Cancer as Revealed by SAGE","year":2010,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Lung Cancer Diagnosis and Treatment","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Ontario Institute for Cancer Research; Princess Margaret Cancer Centre","funders":"Canadian Cancer Society Research Institute; Genome Canada; Canada's Michael Smith Genome Sciences Centre; Canadian Institutes of Health Research; BC Cancer Agency; Health Canada; Genome British Columbia","keywords":"Transcriptome; Biology; Lung cancer; Gene expression profiling; Cancer research; Phenotype; Gene expression; Carcinoma in situ; Pathology; Carcinogenesis; Cancer; Gene; Medicine; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001805513,0.0001728476,0.0002784955,0.0004892155,0.0002666665,0.0005307053,0.0001248338,0.0002078266,0.0008365773],"category_scores_gemma":[0.0002772197,0.0001088386,0.0003080665,0.0006247134,0.0001802121,0.0001541699,0.0002503323,0.0003443176,0.0003967637],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001953449,"about_ca_system_score_gemma":0.0002439147,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006374239,"about_ca_topic_score_gemma":0.001660813,"domain_scores_codex":[0.9997843,0.00001646267,0.00001287509,0.00005789607,0.0000895893,0.00003889732],"domain_scores_gemma":[0.9997539,0.00007794938,0.00005239721,0.00002619744,0.00005916033,0.00003044619],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00008555585,0.00001567896,0.004930832,0.0000482951,0.00001707373,0.00004508498,0.0001069652,0.0001080553,0.9921294,0.00006243261,0.00006597871,0.002384696],"study_design_scores_gemma":[0.00001781856,0.0005075293,0.5331622,0.00003471758,0.0001516458,0.001201155,0.0007480723,0.004997614,0.4512719,0.0004800968,0.007389341,0.00003791268],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9827063,0.000677881,0.006798252,0.00005549928,0.00002271673,0.00006179253,0.007101284,0.0001261056,0.002450153],"genre_scores_gemma":[0.9616852,0.0009022197,0.01018222,0.0001679472,0.00002606348,0.0002137987,0.02232468,0.00009487505,0.004403088],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008365773,"threshold_uncertainty_score":0.002798617,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0157651073821809,"score_gpt":0.2431253388670621,"score_spread":0.2273602314848812,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}