{"id":"W1989928902","doi":"10.1186/1471-2148-11-81","title":"RT-qPCR reveals opsin gene upregulation associated with age and sex in guppies (Poecilia reticulata) - a species with color-based sexual selection and 11 visual-opsin genes","year":2011,"lang":"en","type":"article","venue":"BMC Evolutionary Biology","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":60,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada; Simon Fraser University; University of Victoria","keywords":"Opsin; Biology; Sexual selection; Poecilia; Poeciliidae; Evolutionary biology; Genetics; Locus control region; Gene; Photopigment; Gene duplication; Mate choice; Zoology; Gene expression; Rhodopsin; Mating; Retina; Botany; Neuroscience; Retinal","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000207359,0.0002217458,0.0002247643,0.0001145278,0.0001294439,0.00001411001,0.00006383029,0.0002517875,0.00002102399],"category_scores_gemma":[0.00006495557,0.0001841672,0.0000191614,0.0001927492,0.0003870483,0.00001439439,0.00005379095,0.00006611041,9.195276e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004300354,"about_ca_system_score_gemma":0.0001425814,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001298451,"about_ca_topic_score_gemma":0.002192428,"domain_scores_codex":[0.9987037,0.0002032028,0.000236357,0.0004871823,0.00009407244,0.0002754455],"domain_scores_gemma":[0.9995708,0.00003653094,0.0001291097,0.0001116617,0.00009270957,0.00005911678],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005769439,0.00009205649,0.8452502,0.00001945098,0.00004041632,0.000006176922,0.00008257271,0.00009043491,0.1534331,0.0001544809,0.0001414341,0.0001126794],"study_design_scores_gemma":[0.001328388,0.001225034,0.9877362,0.00002544164,0.00002769753,0.00003963221,0.0002100917,0.000834241,0.007596559,0.0002084605,0.0004689067,0.0002993531],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9967089,0.0008629815,0.001785249,0.00004564909,0.0000302453,0.0003296801,0.00002065532,0.00002467562,0.0001919879],"genre_scores_gemma":[0.9918233,0.00006961251,0.006477334,0.00005502024,0.00004019002,0.0000504742,0.0008567866,0.00001806475,0.0006092177],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1458365,"threshold_uncertainty_score":0.751012,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01952429505734307,"score_gpt":0.2304535601153347,"score_spread":0.2109292650579917,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}