{"id":"W1989971013","doi":"10.3791/3961","title":"Detection of Bacteria Using Fluorogenic DNAzymes","year":2012,"lang":"en","type":"article","venue":"Journal of Visualized Experiments","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Deoxyribozyme; Bacteria; Computational biology; Biology; Microbiology; Chemistry; DNA; Biochemistry; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008178541,0.0009052602,0.0003863824,0.00104084,0.0002015899,0.000647166,0.0008090571,0.001576033,0.0008708651],"category_scores_gemma":[0.001339809,0.0003392689,0.000408013,0.0006175543,0.0008279415,0.0008345474,0.0005488916,0.00088896,0.0008056448],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005872077,"about_ca_system_score_gemma":0.0002216299,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004152677,"about_ca_topic_score_gemma":0.0003868437,"domain_scores_codex":[0.9992091,0.0001565758,0.00003547417,0.0002840689,0.0002404687,0.00007433844],"domain_scores_gemma":[0.9990785,0.0003705259,0.0002956997,0.00006775088,0.0001147455,0.00007277862],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005863226,0.00002633904,0.0004511836,0.0001325678,0.000008479069,0.00005407332,0.00003898542,0.000180532,0.9887523,0.0004043956,0.0001519747,0.009740633],"study_design_scores_gemma":[0.00001149244,0.0002386132,0.0009836657,0.00002291874,0.00001138468,0.0002351501,0.00002180168,0.001214468,0.9936459,0.0001413759,0.003460745,0.00001249357],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.4495487,0.0211019,0.5120125,0.001064371,0.0004204638,0.0003356967,0.001097255,0.002381864,0.01203726],"genre_scores_gemma":[0.7390928,0.009949388,0.23935,0.0008244321,0.0001129777,0.0003445521,0.0009652934,0.00007172958,0.009288923],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.001576033,"threshold_uncertainty_score":0.004325271,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02767030946269961,"score_gpt":0.4167157944472703,"score_spread":0.3890454849845707,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}