{"id":"W1990123554","doi":"10.1371/journal.ppat.1002198","title":"Chlamydia trachomatis Co-opts GBF1 and CERT to Acquire Host Sphingomyelin for Distinct Roles during Intracellular Development","year":2011,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Sphingolipid Metabolism and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":236,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; University of California, San Francisco; Japan Society for the Promotion of Science; Canadian Institutes of Health Research; National Center for Research Resources; University of Texas Health Science Center at San Antonio; Yale University; National Institutes of Health; American Lung Association; Universiteit Utrecht; Oregon State University","keywords":"Chlamydia trachomatis; Biology; Brefeldin A; Cell biology; Chlamydiae; Vesicular transport protein; Endosome; Golgi apparatus; Ceramide; Intracellular; Vesicle; Virology; Genetics; Endoplasmic reticulum","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001844719,0.0002471429,0.0002493095,0.00006230441,0.0002225024,0.00003772811,0.0001824496,0.0001484384,0.00003469001],"category_scores_gemma":[0.0001352704,0.0002397455,0.00007497624,0.00005905727,0.00003942203,0.000008109276,0.00008443416,0.00006416546,0.00001271489],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001319848,"about_ca_system_score_gemma":0.00004844234,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007621618,"about_ca_topic_score_gemma":0.0000351191,"domain_scores_codex":[0.9986364,0.00002975837,0.0003101698,0.0004922167,0.0001345546,0.0003969192],"domain_scores_gemma":[0.9993264,0.00001481463,0.00008531989,0.0002756235,0.00007217393,0.0002256592],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001066904,0.00008016307,0.01749533,0.00008675909,0.00007190315,0.000009262186,0.0016599,0.000001683446,0.9779999,0.00001998274,0.00005623805,0.002412226],"study_design_scores_gemma":[0.0005540216,0.00005273692,0.1075973,0.00004010723,0.00005056196,0.00000952326,0.0001692083,0.00003241436,0.8867902,0.00001111667,0.004365874,0.0003269858],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956659,0.0009711277,0.002479574,0.00002325506,0.00009282877,0.0004547597,0.0001343135,0.00003263227,0.0001455848],"genre_scores_gemma":[0.9849792,0.0000640721,0.01395013,0.0001034645,0.0004408463,0.0001354829,0.000133368,0.00005147373,0.0001419484],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09120971,"threshold_uncertainty_score":0.9776538,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02292663239536477,"score_gpt":0.2303941362877205,"score_spread":0.2074675038923557,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}