{"id":"W1990311621","doi":"10.1371/journal.pone.0056858","title":"Antibiotic Inducibility of the mexXY Multidrug Efflux Operon of Pseudomonas aeruginosa: Involvement of the MexZ Anti-Repressor ArmZ","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University","funders":"Cystic Fibrosis Canada","keywords":"Operon; Repressor; Efflux; Pseudomonas aeruginosa; Biology; Aminoglycoside; Mutant; Microbiology; TetR; Spectinomycin; Multiple drug resistance; trp operon; Gene; Genetics; Gene expression; Antibiotic resistance; Drug resistance; Antibiotics; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002153268,0.0001532002,0.0003266631,0.00002493839,0.00004342895,0.000005984574,0.0006460615,0.0002595171,0.00003007499],"category_scores_gemma":[0.0001783154,0.00009170294,0.0001397283,0.0001380507,0.0004561523,0.000003214761,0.0006542605,0.0001318694,0.000002304866],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000925751,"about_ca_system_score_gemma":0.00006301137,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003419275,"about_ca_topic_score_gemma":0.00005301607,"domain_scores_codex":[0.9986903,0.0001151205,0.0004331739,0.0003368107,0.0002306641,0.0001939453],"domain_scores_gemma":[0.9981434,0.00001543724,0.0003292367,0.001255508,0.0002239937,0.00003243814],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001615475,0.0009839352,0.04897233,0.0001450141,0.0001921187,3.876462e-8,0.00004900644,0.000008064029,0.9493185,0.00002965528,0.00005533439,0.0002299014],"study_design_scores_gemma":[0.0003893152,0.0001708583,0.1376717,0.00009190015,0.00007775845,4.492472e-7,0.00003945785,0.00003624254,0.8613484,0.0000471095,0.00003991465,0.00008683697],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981899,0.0002328117,0.000004435841,0.0005759234,0.0001082168,0.000731133,0.00005065096,0.000004800622,0.0001021302],"genre_scores_gemma":[0.9989914,0.0001688061,0.000594851,0.00006342775,0.00004661306,0.00001007779,0.00001081882,0.00001415433,0.00009985518],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08869942,"threshold_uncertainty_score":0.3739538,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02379541945218009,"score_gpt":0.2133633105904806,"score_spread":0.1895678911383005,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}