{"id":"W1990451002","doi":"10.1083/jcb.200804131","title":"SopB promotes phosphatidylinositol 3-phosphate formation on <i>Salmonella</i> vacuoles by recruiting Rab5 and Vps34","year":2008,"lang":"en","type":"article","venue":"The Journal of Cell Biology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":212,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; University of British Columbia; Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Burroughs Wellcome Fund","keywords":"Phosphatidylinositol; Pi; Biology; Vacuole; Phosphatase; Effector; Cell biology; Kinase; Phosphorylation; Biochemistry; Cytoplasm","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007774675,0.0002389973,0.0001673941,0.0001227082,0.000198212,0.0002392017,0.0001502947,0.0002170277,0.001288859],"category_scores_gemma":[0.00009376449,0.0001437872,0.0002696637,0.00005174292,0.0001585747,0.0001695421,0.0003804699,0.0003415559,0.0005054544],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003140347,"about_ca_system_score_gemma":0.0002668468,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001215892,"about_ca_topic_score_gemma":0.001383166,"domain_scores_codex":[0.9999123,0.00001501921,0.00000534758,0.00001632662,0.00001845321,0.00003256546],"domain_scores_gemma":[0.9999526,0.000006372176,0.000009280494,0.00000377652,0.000005562111,0.0000224061],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001207501,0.00001564151,0.0002511881,0.00003568559,0.000002193856,0.00003649609,0.00001248685,0.00005359352,0.9985232,0.0001526516,0.00007651358,0.0007196904],"study_design_scores_gemma":[0.00001927939,0.0001279802,0.008527428,0.000007906432,0.000007968617,0.0001690984,0.00004400859,0.00208257,0.9854718,0.00009744485,0.003438806,0.000005796424],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.993552,0.0009692514,0.002748371,0.0001412089,0.00002204895,0.0000199006,0.000144476,0.0001371509,0.002265696],"genre_scores_gemma":[0.9962652,0.0003342805,0.001546222,0.00007278995,0.00000658382,0.00001962339,0.0002333827,0.00002272188,0.00149924],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001288859,"threshold_uncertainty_score":0.004311681,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02730177858285257,"score_gpt":0.2244744713630827,"score_spread":0.1971726927802302,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}