{"id":"W1990605946","doi":"10.1128/jvi.03378-14","title":"Conserved Motifs in a Tombusvirus Polymerase Modulate Genome Replication, Subgenomic Transcription, and Amplification of Defective Interfering RNAs","year":2015,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"York University","funders":"","keywords":"Biology; Subgenomic mRNA; RNA-dependent RNA polymerase; Genetics; Polymerase; RNA; Viral replication; Virology; RNA polymerase; Virus; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001224474,0.0002730133,0.0001832855,0.00008127746,0.0001429631,0.000226194,0.0001622098,0.0002430247,0.001089283],"category_scores_gemma":[0.000173631,0.0001030382,0.0001975047,0.00007658186,0.000268741,0.0001428121,0.000141051,0.0003174876,0.0003347123],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003115367,"about_ca_system_score_gemma":0.0001506606,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000304851,"about_ca_topic_score_gemma":0.0004816816,"domain_scores_codex":[0.9999007,0.00001541924,0.000006218096,0.0000339644,0.00002107707,0.00002263896],"domain_scores_gemma":[0.9999061,0.00002470281,0.00003050425,0.000009594725,0.000006950187,0.0000222577],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001495246,0.00001886523,0.0002617843,0.00002851791,0.000002885676,0.00002089693,0.00001123797,0.00006834571,0.9982327,0.00006046133,0.000008523596,0.001136154],"study_design_scores_gemma":[0.00003493418,0.0005463776,0.006471748,0.000008183659,0.00001669438,0.0002064137,0.00002736453,0.001653937,0.9896418,0.00009027226,0.001296922,0.000005329674],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968936,0.0009518054,0.001580348,0.00002641898,0.00001532034,0.00001593295,0.00004796234,0.0000384513,0.0004300868],"genre_scores_gemma":[0.9965695,0.0002412725,0.002484401,0.00002584469,0.000008358469,0.00001709265,0.0001536765,0.000009767642,0.0004900336],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001089283,"threshold_uncertainty_score":0.00364399,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06369683425611587,"score_gpt":0.2719518516516776,"score_spread":0.2082550173955617,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}