{"id":"W1990609531","doi":"10.1089/aid.2004.20.1100","title":"HIV Type 1 BF Recombinant Strains Exhibit Different pol Gene Mosaic Patterns: Descriptive Analysis from 284 Patients under Treatment Failure","year":2004,"lang":"en","type":"article","venue":"AIDS Research and Human Retroviruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"ca_institutions":"AIDS Vancouver","funders":"","keywords":"Recombinant DNA; Virology; Biology; Human immunodeficiency virus (HIV); Gene; Virus; Mosaic; Recombinant virus; Genetics; Medicine; History","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001307322,0.0002480557,0.000341048,0.0007032302,0.0004543027,0.000297042,0.000128321,0.0002586571,0.001228866],"category_scores_gemma":[0.0007592377,0.0002213035,0.0002136026,0.0004075982,0.0002559269,0.0001660977,0.0002209189,0.0002383396,0.0001782959],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002535124,"about_ca_system_score_gemma":0.0001303163,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003747861,"about_ca_topic_score_gemma":0.002557626,"domain_scores_codex":[0.9998455,0.0000246991,0.00001543185,0.00003918977,0.00002837259,0.00004689748],"domain_scores_gemma":[0.9997852,0.00005825102,0.00007026455,0.00002233078,0.00002441467,0.00003946471],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004301873,0.00007435578,0.9876807,0.00001688952,0.00002270047,0.001043289,0.0007120298,0.00005524678,0.0049106,0.00002498972,0.00008870684,0.004940513],"study_design_scores_gemma":[0.00001603904,0.000374421,0.9918551,0.000007235968,0.00002365407,0.0055935,0.0007183654,0.0001560868,0.0006891529,0.00002430372,0.0005349526,0.000007186755],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9997009,0.00004724495,0.00003921188,0.000005341373,5.369901e-7,0.000004172329,0.00006982238,9.945096e-7,0.0001316996],"genre_scores_gemma":[0.9995154,0.00005841368,0.00006827141,0.000007536204,0.000003214824,0.000006313661,0.0002385578,0.000001981476,0.0001002987],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003747861,"threshold_uncertainty_score":0.007452071,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06432744541869294,"score_gpt":0.3214889812912446,"score_spread":0.2571615358725517,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}