{"id":"W1990633043","doi":"10.3168/jds.2010-3435","title":"Population structure of rumen Escherichia coli associated with subacute ruminal acidosis (SARA) in dairy cattle","year":2010,"lang":"en","type":"article","venue":"Journal of Dairy Science","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":76,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Stapledon Memorial Trust; Dairy Farmers of Canada; University of Manitoba","keywords":"Escherichia coli; Biology; Rumen; Microbiology; Virulence; Population; Animal science; Food science; Gene; Genetics; Fermentation; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004710998,0.0001776843,0.0003547134,0.001039443,0.0002938891,0.0005221646,0.0002215036,0.0004367277,0.0004521947],"category_scores_gemma":[0.0007826952,0.0002319132,0.0001624736,0.0004465136,0.0003132354,0.0002027833,0.0002503185,0.000278602,0.0001487763],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003801093,"about_ca_system_score_gemma":0.0001306241,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002178819,"about_ca_topic_score_gemma":0.002084842,"domain_scores_codex":[0.9992914,0.0001468111,0.00005234142,0.0002378944,0.0001357533,0.0001357436],"domain_scores_gemma":[0.9992859,0.0001205104,0.00028732,0.00004059734,0.0001232325,0.0001425042],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001208422,0.0002002229,0.8495137,0.0000299507,0.00008715688,0.000188184,0.0005974915,0.0002434144,0.1428453,0.00003947603,0.00004928982,0.004997391],"study_design_scores_gemma":[0.000006029038,0.0003783307,0.9971847,0.000003337846,0.00001351286,0.0001755906,0.0002725201,0.0003305484,0.001509153,0.00001513222,0.0001060265,0.000004992089],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9997696,0.0000482416,0.000082473,0.000003594404,5.654e-7,0.000002533225,0.00003758311,0.00000105569,0.00005437072],"genre_scores_gemma":[0.9993974,0.00005101166,0.0001746226,0.00001152794,0.000002814394,0.000007329699,0.0002093747,0.000001424521,0.0001445702],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002178819,"threshold_uncertainty_score":0.004332304,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01563802123322155,"score_gpt":0.2910740848156511,"score_spread":0.2754360635824295,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}