{"id":"W1990847198","doi":"10.1128/jb.183.22.6714-6716.2001","title":"Presence of Prokaryotic and Eukaryotic Species in All Subgroups of the PP <sub>i</sub> -Dependent Group II Phosphofructokinase Protein Family","year":2001,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary; Institute for Marine Biosciences","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Science Foundation","keywords":"Biology; Eukaryote; Phosphofructokinase; Lineage (genetic); Phylogenetic tree; Genetics; Gene; Sinorhizobium; Biochemistry; Phylogenetics; Enzyme; Symbiosis; Bacteria; Genome; Rhizobiaceae; Glycolysis","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003124386,0.0001165279,0.0002717356,0.00005671031,0.00003421996,0.000006481985,0.0002722603,0.000118385,0.000007779509],"category_scores_gemma":[0.00008508858,0.00008228893,0.00009103733,0.000101286,0.0002383474,0.00001210316,0.0001410014,0.0001570107,2.68308e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002165871,"about_ca_system_score_gemma":0.0000915769,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002866251,"about_ca_topic_score_gemma":0.00006094887,"domain_scores_codex":[0.998889,0.0001358629,0.0005253732,0.0001605021,0.0001219437,0.0001672622],"domain_scores_gemma":[0.999033,0.00001918961,0.0005129718,0.0002583481,0.000130405,0.00004607585],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002835617,0.0001327839,0.02872939,0.00003083349,0.00004124295,0.000008503315,0.00009232845,0.00004523273,0.9692206,0.000102863,0.00006071384,0.001251959],"study_design_scores_gemma":[0.0007017376,0.000800768,0.526438,0.00007237714,0.00002254036,0.0001712696,0.0001329307,0.00001866688,0.4704808,0.0001471197,0.0009265993,0.0000871782],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970766,0.00215902,0.0001160947,0.0001884836,0.0001469455,0.0002283846,0.000008678463,0.000001007788,0.00007480547],"genre_scores_gemma":[0.9974492,0.002171709,0.0001444389,0.0000582139,0.00007856818,0.000009830632,0.000003557506,0.000009965295,0.00007447208],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4987398,"threshold_uncertainty_score":0.3355645,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01401330370711561,"score_gpt":0.2263633220606623,"score_spread":0.2123500183535467,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}