{"id":"W1990870889","doi":"10.1139/w11-090","title":"Intraspecific and interspecific interactions among proteins regulating exopolysaccharide synthesis in <i>Streptococcus thermophilus</i>, <i>Streptococcus iniae</i>, and <i>Lactococcus lactis</i> subsp. <i>cremoris</i> and the assessment of potential lateral gene transfer","year":2011,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"U.S. Department of Agriculture; Utah State University; U.S. Department of State","keywords":"Biology; Lactococcus lactis; Streptococcus thermophilus; Streptococcus iniae; Intraspecific competition; Auxotrophy; Biochemistry; Microbiology; Gene; Genetics; Bacteria; Lactobacillus; Escherichia coli","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002983228,0.0003794518,0.0002626176,0.0003294751,0.0001580683,0.0004298265,0.000206208,0.0002471476,0.0004487789],"category_scores_gemma":[0.0004090399,0.0001921044,0.0004040306,0.0002256329,0.0002060892,0.0001879334,0.0004811938,0.0003878875,0.0002099962],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004889101,"about_ca_system_score_gemma":0.0002632541,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001134277,"about_ca_topic_score_gemma":0.001226387,"domain_scores_codex":[0.9995702,0.0001074743,0.00003977843,0.00005816722,0.0001348265,0.00008960532],"domain_scores_gemma":[0.9996668,0.00009257262,0.0001187145,0.00002881462,0.00003981476,0.00005328312],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000031935,0.00001002958,0.000317985,0.000008413908,0.000004416444,0.00002017326,0.00001723101,0.00003779818,0.9992439,0.00002826836,0.000003745661,0.0002760872],"study_design_scores_gemma":[0.000009293018,0.0002317521,0.02150581,0.000006434968,0.00004313545,0.000300297,0.0001505061,0.002063292,0.9748224,0.00005415183,0.0007999677,0.0000130501],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983978,0.0001889645,0.0009545656,0.00002289861,0.000004635765,0.000008400621,0.00004642391,0.00001562601,0.0003607033],"genre_scores_gemma":[0.9973188,0.0001233999,0.00156374,0.00002406384,0.000003253325,0.00001774818,0.0002922763,0.00001668006,0.0006401112],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001134277,"threshold_uncertainty_score":0.003547311,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01059142520175272,"score_gpt":0.2044434369308918,"score_spread":0.1938520117291391,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}