{"id":"W1991024712","doi":"10.1038/nature10342","title":"The genome sequence of Atlantic cod reveals a unique immune system","year":2011,"lang":"en","type":"article","venue":"Nature","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":850,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Center for Information Technology; Genome Atlantic; Norges Miljø- og Biovitenskapelige Universitet; Norwegian Sequencing Centre; Norges Forskningsråd; Universitetet i Oslo; Wellcome Trust","keywords":"Gadus; Biology; Atlantic cod; Major histocompatibility complex; Acquired immune system; Immune system; Genome; Gene; Genetics; Evolutionary biology; Whole genome sequencing; Fishery; Fish <Actinopterygii>","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009254698,0.000524917,0.0004076227,0.0007104012,0.0006653154,0.0007138253,0.0002597326,0.0005757451,0.00185325],"category_scores_gemma":[0.0002295537,0.0002288483,0.0005446365,0.001155786,0.0002477952,0.0002462394,0.0004788091,0.0008481802,0.001372611],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005336651,"about_ca_system_score_gemma":0.0008823776,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01308814,"about_ca_topic_score_gemma":0.01197631,"domain_scores_codex":[0.9998839,0.00000404915,0.0000102388,0.00004994098,0.00002948983,0.00002244975],"domain_scores_gemma":[0.9998298,0.00002130572,0.0000349225,0.00001273857,0.00004780871,0.00005344215],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000981839,0.00007444408,0.04537116,0.001301539,0.0001415946,0.002150028,0.0004769419,0.0006643857,0.8797814,0.0005184807,0.006051618,0.06248663],"study_design_scores_gemma":[0.0001169628,0.0003483871,0.7922445,0.0004271609,0.0005961977,0.004016599,0.000881387,0.00228607,0.05377121,0.001003905,0.1441569,0.0001507217],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8726392,0.01051857,0.008706366,0.0009697001,0.0005591633,0.0000999755,0.09404144,0.0005955482,0.0118701],"genre_scores_gemma":[0.7394887,0.008514668,0.03330978,0.001549738,0.0002727343,0.0001251958,0.2061244,0.000427905,0.01018677],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01308814,"threshold_uncertainty_score":0.02602392,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01218457658776866,"score_gpt":0.2226072522510433,"score_spread":0.2104226756632746,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}