{"id":"W1991074295","doi":"10.1016/j.mimet.2008.11.002","title":"Use of broad range16S rDNA PCR in clinical microbiology","year":2008,"lang":"en","type":"review","venue":"Journal of Microbiological Methods","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":156,"is_retracted":false,"has_abstract":false,"ca_institutions":"Health Canada","funders":"","keywords":"Biology; 16S ribosomal RNA; Microbiology; Organism; Computational biology; Polymerase chain reaction; Identification (biology); Molecular diagnostics; Ribosomal DNA; Genetics; Bacteria; Phylogenetics; Gene; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.005256949,0.000543883,0.00733519,0.0007889713,0.00002949672,0.00001575816,0.0005726858,0.001750834,0.0003992491],"category_scores_gemma":[0.0131084,0.0003063959,0.003114623,0.0006123937,0.0006824561,0.00007973299,0.0002758735,0.003014035,0.00003369696],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001846298,"about_ca_system_score_gemma":0.0008958959,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000154748,"about_ca_topic_score_gemma":0.000001789584,"domain_scores_codex":[0.9864187,0.007866255,0.004465831,0.0004960338,0.0001199942,0.0006332233],"domain_scores_gemma":[0.9860839,0.0101541,0.002363149,0.0005036886,0.0004548739,0.0004403449],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0006458731,0.0009969862,0.00164064,0.002617361,0.0005949537,0.0007558264,0.00001104021,1.177076e-7,0.006546012,0.000005340421,0.01061127,0.9755746],"study_design_scores_gemma":[0.001301158,0.002413683,0.001293658,0.008857205,0.000552286,0.01048348,0.000004015428,2.224671e-7,0.0002054593,0.00001269706,0.974622,0.0002541733],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.004332548,0.9936823,0.0002688068,0.0001124504,0.0006778364,0.0007204456,0.0001221798,0.000009999587,0.00007343233],"genre_scores_gemma":[0.000009791222,0.8631118,0.1359433,0.0002380451,0.0004784017,0.000009868606,0.00005891224,0.00003379557,0.0001161174],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9753204,"threshold_uncertainty_score":0.9999388,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.421080414400709,"score_gpt":0.549833014533743,"score_spread":0.128752600133034,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}