{"id":"W1991145778","doi":"10.1139/w06-102","title":"An efficient system for markerless gene replacement applicable in a wide variety of enterobacterial species","year":2007,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Canadian Association of Gastroenterology","keywords":"Biology; Salmonella enterica; Gene; Escherichia coli; Genetics; Mutagenesis; Salmonella; Vibrio parahaemolyticus; Enterobacteriaceae; Polymerase chain reaction; Vibrio; Gene cassette; Vibrio cholerae; Microbiology; Computational biology; Mutation; Bacteria; Integron","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009480714,0.0009185296,0.001241531,0.00111888,0.000669162,0.0007948448,0.00142987,0.000964486,0.00240913],"category_scores_gemma":[0.0007573871,0.0008906047,0.0007833723,0.0008780056,0.0003884037,0.0006144649,0.001384642,0.00272172,0.004012063],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003984654,"about_ca_system_score_gemma":0.0007673966,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008552901,"about_ca_topic_score_gemma":0.001263308,"domain_scores_codex":[0.9990157,0.0001639469,0.0001588875,0.0001934193,0.0003743235,0.00009379898],"domain_scores_gemma":[0.9995566,0.00008621088,0.00009966332,0.0001346199,0.0000517958,0.00007114653],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000920068,0.00006596457,0.0001312082,0.0001544135,0.00001516125,0.0001109539,0.00004553859,0.0001594338,0.9823241,0.0004712775,0.0005856297,0.0158443],"study_design_scores_gemma":[0.0001238155,0.0006404311,0.002163923,0.00006775105,0.000119205,0.002713582,0.00004083194,0.003204821,0.9106666,0.0003886268,0.07977168,0.0000986896],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.12966,0.00480378,0.8494875,0.0005659753,0.0006592702,0.001912225,0.002990279,0.006415096,0.00350588],"genre_scores_gemma":[0.2272143,0.005441098,0.733349,0.0003620659,0.0001119365,0.002357919,0.01159265,0.001943258,0.01762782],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.00240913,"threshold_uncertainty_score":0.008059323,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007102612845585062,"score_gpt":0.2101116081289097,"score_spread":0.2030089952833246,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}