{"id":"W1991331972","doi":"10.1186/1742-4690-5-43","title":"Highly diversified multiply drug-resistant HIV-1 quasispecies in PBMCs: a case report","year":2008,"lang":"en","type":"article","venue":"Retrovirology","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Viral quasispecies; Virology; Peripheral blood mononuclear cell; Drug resistance; Frameshift mutation; Genotyping; Medicine; Biology; Mutation; Nonsense mutation; Genetics; Virus; Gene; Genotype; In vitro; Hepatitis C virus","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004440497,0.001692556,0.00110029,0.002167737,0.003653107,0.002064003,0.001505171,0.004560618,0.002737137],"category_scores_gemma":[0.002956865,0.00159415,0.0007965067,0.001262324,0.001852332,0.001429189,0.001629461,0.003078876,0.001241718],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001145813,"about_ca_system_score_gemma":0.0005063127,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002092574,"about_ca_topic_score_gemma":0.002154368,"domain_scores_codex":[0.9988285,0.0001680743,0.00009241211,0.0004249238,0.0001746054,0.0003115719],"domain_scores_gemma":[0.99821,0.00057976,0.0002571481,0.0001880887,0.00009413179,0.0006709587],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"case_report","study_design_gemma":"case_report","study_design_scores_codex":[0.00006583312,0.00007762876,0.009280806,0.0000389991,0.00001404802,0.9865058,0.0005503945,0.00008875634,0.00173605,0.0001415609,0.0002196468,0.0012805],"study_design_scores_gemma":[0.00001977491,0.0001124361,0.004763423,0.00002076345,0.00001539685,0.993175,0.0002700239,0.0003617558,0.0005993876,0.0001435909,0.000502367,0.00001606686],"study_design_candidate":"case_report","study_design_consensus":"case_report","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9880205,0.002240729,0.002906725,0.001184838,0.000184033,0.0001602199,0.000219468,0.0001106843,0.004972999],"genre_scores_gemma":[0.9966456,0.0005831787,0.001312782,0.0004273728,0.0002694571,0.00002525828,0.00008134771,0.00001941043,0.000635469],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004560618,"threshold_uncertainty_score":0.009156644,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02070934300538851,"score_gpt":0.247567059804885,"score_spread":0.2268577167994965,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}