{"id":"W1991777830","doi":"10.1186/1471-2105-11-64","title":"ICC-CLASS: isotopically-coded cleavable crosslinking analysis software suite","year":2010,"lang":"en","type":"article","venue":"BMC Bioinformatics","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":59,"is_retracted":false,"has_abstract":true,"ca_institutions":"Genome British Columbia; University of Victoria","funders":"Genome British Columbia; Genome Canada","keywords":"Reagent; Software suite; Mass spectrometry; Software; Combinatorial chemistry; Chemistry; Isotopic labeling; Computer science; Peptide; Chromatography; Programming language; Organic chemistry; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003705874,0.002886127,0.001294625,0.002727133,0.0006621564,0.002114334,0.003847539,0.001408003,0.03158214],"category_scores_gemma":[0.004574405,0.001604779,0.001575477,0.001252034,0.0006425275,0.001514571,0.002154411,0.003148936,0.0288075],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009636676,"about_ca_system_score_gemma":0.002423104,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001622447,"about_ca_topic_score_gemma":0.001839575,"domain_scores_codex":[0.9983276,0.0002818084,0.0002200544,0.0003779383,0.0005869113,0.000205664],"domain_scores_gemma":[0.9977494,0.0008635034,0.000351268,0.0003363223,0.0005026243,0.0001969441],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001983633,0.0004319553,0.004835138,0.002702644,0.0006309056,0.000577817,0.0004629837,0.008980452,0.08299231,0.01190288,0.7197132,0.1647861],"study_design_scores_gemma":[0.001031818,0.0005616049,0.00823419,0.0005280295,0.0003060127,0.001241477,0.0001415991,0.1604494,0.2225935,0.01964602,0.5845939,0.0006724403],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.00395747,0.0003400758,0.2551312,0.0001318902,0.0001298262,0.0005160947,0.02375388,0.7092689,0.006770737],"genre_scores_gemma":[0.04029945,0.00112178,0.5586192,0.001099816,0.0001525867,0.007188123,0.1692246,0.2071026,0.01519189],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.03158214,"threshold_uncertainty_score":0.1056528,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01220601937726841,"score_gpt":0.2581573950639124,"score_spread":0.245951375686644,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}