{"id":"W1991813514","doi":"10.1128/iai.00339-13","title":"Divergent Immune Responses to Mycobacterium avium subsp. paratuberculosis Infection Correlate with Kinome Responses at the Site of Intestinal Infection","year":2013,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; Ministry of Agriculture - Saskatchewan","keywords":"Paratuberculosis; Biology; Kinome; Immune system; Microbiology; Mycobacterium; Virology; Immunology; Gene; Genetics; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001170337,0.0001745334,0.000216562,0.0002978616,0.0001391707,0.0003567971,0.00009972184,0.0002828033,0.0008100858],"category_scores_gemma":[0.0003437061,0.0001344205,0.0001401093,0.0001779271,0.0001826348,0.0001906549,0.0002476963,0.0004425752,0.0001949765],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001191235,"about_ca_system_score_gemma":0.00004914212,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002844851,"about_ca_topic_score_gemma":0.0004522939,"domain_scores_codex":[0.9997503,0.00002961451,0.0000193663,0.00008492135,0.00003862969,0.0000772312],"domain_scores_gemma":[0.9997074,0.00006980039,0.00008808447,0.00002382752,0.00004247669,0.00006843271],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001265844,0.00001090691,0.005347208,0.00001807522,0.000006580067,0.0000263952,0.00003778598,0.00002617523,0.9938521,0.000008836379,0.00001014335,0.0005291361],"study_design_scores_gemma":[0.000009387736,0.0004106736,0.8322173,0.00001205531,0.00003764543,0.0007072877,0.0003923252,0.001055893,0.164289,0.0001143032,0.0007419317,0.00001217215],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988627,0.0001709217,0.0005367357,0.00001249445,0.000002922264,0.000005616065,0.0001720801,0.000006298194,0.0002301433],"genre_scores_gemma":[0.9988753,0.00008428298,0.0004240062,0.00003873242,0.000003340257,0.00001331776,0.0003336497,0.000003366153,0.0002240217],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008100858,"threshold_uncertainty_score":0.002709985,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02124937459917308,"score_gpt":0.2806551149856147,"score_spread":0.2594057403864417,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}