{"id":"W1992709794","doi":"10.1002/prot.22272","title":"Trapping open and closed forms of FitE—A group III periplasmic binding protein","year":2008,"lang":"en","type":"article","venue":"Proteins Structure Function and Bioinformatics","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":true,"ca_institutions":"Biotechnology Research Institute; McGill University","funders":"Biological and Environmental Research; Basic Energy Sciences; National Center for Research Resources; Canadian Institutes of Health Research; National Institutes of Health; U.S. Department of Energy","keywords":"Periplasmic space; Chemistry; Crystallography; Stereochemistry; Biochemistry; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001421191,0.0002254836,0.0002548613,0.0001261125,0.0002432319,0.0003357586,0.0003554857,0.0004487277,0.0009371614],"category_scores_gemma":[0.0002160641,0.0001556742,0.0003073402,0.0001125774,0.0003539126,0.0003889313,0.0002969489,0.0005185335,0.0002795468],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000241013,"about_ca_system_score_gemma":0.0001177572,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004888347,"about_ca_topic_score_gemma":0.0003699638,"domain_scores_codex":[0.9998912,0.00001333352,0.000006612781,0.00003987097,0.00002704306,0.0000220104],"domain_scores_gemma":[0.9998769,0.00002942703,0.00003733199,0.00001261816,0.00001250922,0.00003121005],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001922214,0.00008780051,0.00295925,0.00005674479,0.00002343231,0.0002855326,0.0001500889,0.0001825553,0.9907839,0.0004058941,0.0002673739,0.00460537],"study_design_scores_gemma":[0.0000723238,0.0004784181,0.0217932,0.00002085716,0.00002815085,0.003378646,0.0002450536,0.006349457,0.9555579,0.0005479612,0.01147669,0.00005123578],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954501,0.0006995581,0.003237652,0.00006744498,0.0000111834,0.000008850046,0.00008635975,0.00005475833,0.000384089],"genre_scores_gemma":[0.9954574,0.0001260716,0.00281711,0.00007701656,0.000003747255,0.000007388806,0.000356694,0.00001409921,0.001140562],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009371614,"threshold_uncertainty_score":0.003135145,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009809252533767281,"score_gpt":0.2061277104495216,"score_spread":0.1963184579157543,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}