{"id":"W1993016819","doi":"10.4161/mge.20498","title":"Diversity of integrating conjugative elements in actinobacteria","year":2012,"lang":"en","type":"article","venue":"Mobile Genetic Elements","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"Academy of Finland; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Actinobacteria; Plasmid; Biology; Bacterial conjugation; DNA; Bacteria; Streptomyces; Genetics; Horizontal gene transfer; Gene; Secretion; Bacterial genetics; Computational biology; Microbiology; Escherichia coli; Biochemistry; Genome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000247187,0.0001697054,0.0001942324,0.00007314204,0.0000982526,0.000005765222,0.0002653738,0.0001788213,0.0001162122],"category_scores_gemma":[0.00003449443,0.000166987,0.00005679753,0.0001363526,0.00008393659,0.000004806082,0.001016391,0.00008963236,0.000007218224],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002655235,"about_ca_system_score_gemma":0.00002682202,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005998383,"about_ca_topic_score_gemma":0.00007903331,"domain_scores_codex":[0.9986948,0.00007434545,0.0004259726,0.0002589031,0.0001304055,0.000415541],"domain_scores_gemma":[0.999355,0.000006515078,0.0002140117,0.0002913109,0.00005959355,0.0000735755],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003532834,0.0001313278,0.4127454,0.000009681074,0.00003428519,4.104707e-7,0.0001588455,0.000002104735,0.5795205,0.000009696424,0.00004533325,0.007307018],"study_design_scores_gemma":[0.0009321164,0.0005597448,0.2446456,0.00001914037,0.00001924642,0.000003155277,0.0003536027,0.00001064968,0.7453108,0.00003160505,0.007905328,0.0002090441],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985709,0.0003006074,0.00009988794,0.00001003741,0.0002906977,0.0003904644,0.00003388532,0.000006535992,0.0002969608],"genre_scores_gemma":[0.9959779,0.0001860451,0.003458107,0.00006210917,0.0001114822,0.00004855905,0.00006510386,0.00001498422,0.00007570224],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1680999,"threshold_uncertainty_score":0.6809534,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01035552327856251,"score_gpt":0.251157036174694,"score_spread":0.2408015128961315,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}