{"id":"W1993304014","doi":"10.1093/nar/gkm483","title":"A search for structurally similar cellular internal ribosome entry sites","year":2007,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":85,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa; Children's Hospital of Eastern Ontario","funders":"Canadian Institutes of Health Research","keywords":"Internal ribosome entry site; Biology; XIAP; Translation (biology); Eukaryotic translation; Untranslated region; Cell biology; Inhibitor of apoptosis; Ribosome; Computational biology; Genetics; Messenger RNA; Virology; RNA; Gene; Apoptosis; Programmed cell death; Caspase","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003441023,0.0003723271,0.0006997848,0.0009949342,0.0004854581,0.0004173663,0.0004621989,0.0005479152,0.003042015],"category_scores_gemma":[0.0008195267,0.0001699982,0.0005427165,0.0009513552,0.0002234002,0.000296427,0.0003396055,0.0005189261,0.00115329],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003649122,"about_ca_system_score_gemma":0.0005199545,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003699298,"about_ca_topic_score_gemma":0.0009224706,"domain_scores_codex":[0.9997781,0.00003261237,0.00002007252,0.00008578411,0.00005677222,0.00002679378],"domain_scores_gemma":[0.9996228,0.0001324854,0.0001189023,0.00004022143,0.00004115606,0.00004446701],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008206624,0.0003305781,0.01613231,0.0007382501,0.0001646484,0.002321686,0.0001940334,0.002528287,0.9360144,0.002099516,0.0008063524,0.03784921],"study_design_scores_gemma":[0.0003647868,0.00422512,0.1654486,0.0002010844,0.001184403,0.01881634,0.001010163,0.02574957,0.7093888,0.005236886,0.06824288,0.0001313783],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9721503,0.004802889,0.016029,0.0002093791,0.00004393276,0.0002083024,0.002747156,0.0002842701,0.003524741],"genre_scores_gemma":[0.9355959,0.001669305,0.04763684,0.000290867,0.0000330042,0.000146514,0.01257763,0.00005176635,0.001998215],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003042015,"threshold_uncertainty_score":0.01017654,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06625511264754946,"score_gpt":0.3952927746255743,"score_spread":0.3290376619780249,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}