{"id":"W1993548583","doi":"10.1128/mbio.00342-10","title":"Genome Variation in Cryptococcus gattii, an Emerging Pathogen of Immunocompetent Hosts","year":2011,"lang":"en","type":"article","venue":"mBio","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":215,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ontario Institute for Cancer Research; University of British Columbia; Island Health; BC Centre for Disease Control; BC Cancer Agency; Canada's Michael Smith Genome Sciences Centre","funders":"National Human Genome Research Institute; Medical Research Council; National Institutes of Health; British Columbia Centre for Disease Control; Genome British Columbia; National Institute of Allergy and Infectious Diseases; National Health and Medical Research Council; Broad Institute; Canadian Institutes of Health Research; Genome Canada; Howard Hughes Medical Institute","keywords":"Cryptococcus gattii; Biology; Genome; Cryptococcus neoformans; Genetics; Cryptococcosis; Virulence; Genotype; Phylogenetic tree; Gene; Microbiology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009829315,0.0001613232,0.0001244434,0.0005874735,0.0002741563,0.0002492784,0.0001144889,0.0002312794,0.0008446472],"category_scores_gemma":[0.000300299,0.00007240097,0.0001309144,0.000655448,0.0001554152,0.00007893078,0.0001681243,0.0002111001,0.00008730663],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002207023,"about_ca_system_score_gemma":0.0001232156,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003214786,"about_ca_topic_score_gemma":0.004163588,"domain_scores_codex":[0.9999082,0.0000123486,0.000006142453,0.00003748404,0.00001603571,0.00001960693],"domain_scores_gemma":[0.9998517,0.00003875731,0.00005171578,0.00001089931,0.0000144809,0.00003241146],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0009248533,0.00008194254,0.2238757,0.00008107675,0.00007479697,0.0007779227,0.0005224348,0.0004281173,0.7625135,0.0001516318,0.0001877265,0.01038025],"study_design_scores_gemma":[0.000007924616,0.0001242554,0.9884893,0.00001024071,0.00002558944,0.0009671894,0.0003374233,0.0005668647,0.008602776,0.00005210114,0.0008117465,0.000004568195],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991604,0.00005815247,0.000114358,0.00001167169,0.000001310125,0.000004062913,0.0004297767,0.000003916775,0.0002164359],"genre_scores_gemma":[0.9989356,0.0000415379,0.0003468197,0.00001285864,0.000001373245,0.000004171286,0.0005259456,0.000003170994,0.0001285223],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003214786,"threshold_uncertainty_score":0.006392121,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04649525621467164,"score_gpt":0.2805821288130755,"score_spread":0.2340868725984038,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}