{"id":"W1993858609","doi":"10.1016/j.micinf.2006.12.016","title":"Citrobacter rodentium virulence in mice associates with bacterial load and the type III effector NleE","year":2007,"lang":"en","type":"article","venue":"Microbes and Infection","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":false,"ca_institutions":"McMaster University; University of British Columbia; Health Canada; Canada's Michael Smith Genome Sciences Centre","funders":"","keywords":"Citrobacter rodentium; Microbiology; Virulence; Biology; Effector; Type three secretion system; Pathogen; Colonisation; Mutant; Bacteria; Citrobacter; Secretion; Enterobacteriaceae; Escherichia coli; Wild type; Pathogenicity island; Colonization; Gene; Immunology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006125946,0.001335805,0.0004298374,0.001248805,0.0002469073,0.0007826534,0.0003914316,0.0008065065,0.001124944],"category_scores_gemma":[0.0006074544,0.0006793464,0.0003422161,0.0002881143,0.0007433022,0.0004682413,0.0003724841,0.001819634,0.0003266515],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006140504,"about_ca_system_score_gemma":0.0003149438,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000583373,"about_ca_topic_score_gemma":0.0007959058,"domain_scores_codex":[0.9992486,0.0001972188,0.0000505657,0.0001721914,0.0001332079,0.0001983157],"domain_scores_gemma":[0.998266,0.0002299981,0.0006223235,0.0002358859,0.00009884458,0.0005469584],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.003354912,0.0004302678,0.002997718,0.00003644675,0.0000158094,0.0001634175,0.00003032145,0.0001050144,0.9910367,0.0001379308,0.00008656587,0.001604763],"study_design_scores_gemma":[0.0002076581,0.002869859,0.03753943,0.00003024099,0.00008583095,0.001209404,0.0001244403,0.001737616,0.9549137,0.0003744243,0.0008750682,0.00003246142],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964409,0.0008531243,0.001330374,0.0002693867,0.00002696255,0.00001867176,0.0002669,0.0001314147,0.0006622728],"genre_scores_gemma":[0.9953993,0.0003036851,0.001490874,0.0001139784,0.00001629494,0.00002841967,0.0002541749,0.00004722289,0.002346134],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001335805,"threshold_uncertainty_score":0.004455268,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003748150139325916,"score_gpt":0.2296725498645281,"score_spread":0.2259243997252022,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}