{"id":"W1994346073","doi":"10.1089/aid.2012.0094","title":"Short Communication: Antibody Responses to Human Immunodeficiency Virus Envelope from Infections with Multiple Subtypes Utilize the 1F7-Idiotypic Repertoire","year":2012,"lang":"en","type":"article","venue":"AIDS Research and Human Retroviruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Memorial University of Newfoundland; Jewish General Hospital; Clinique Paro Excellence; Centre Hospitalier de l’Université de Montréal; McGill University; Hôpital Saint-Luc; McGill University Health Centre","funders":"Canadian Institutes of Health Research; University of Melbourne; McGill University Health Centre; McGill University","keywords":"Somatic hypermutation; Idiotype; Immunoglobulin Idiotypes; Virology; Biology; Repertoire; Antibody; Immunology; Antigen; Virus; Neutralization; Monoclonal antibody; B cell","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001448819,0.000263068,0.0003265329,0.0003796285,0.004193848,0.0001809802,0.0006571164,0.0001707691,0.0007681298],"category_scores_gemma":[0.0004826059,0.000166219,0.00006936958,0.0005220015,0.001632723,0.0003101148,0.0005553827,0.0009015775,0.0008430261],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000126505,"about_ca_system_score_gemma":0.0001274218,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008734863,"about_ca_topic_score_gemma":0.002982699,"domain_scores_codex":[0.996573,0.001270625,0.0003219746,0.0004507538,0.0002577296,0.001125892],"domain_scores_gemma":[0.9968147,0.001409234,0.00004770749,0.001259269,0.0002942482,0.0001748478],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006577217,0.0006795889,0.8408955,0.000008724251,0.0002771348,0.000007077594,0.001443887,2.023661e-7,0.1500353,0.002260559,0.001807085,0.001927167],"study_design_scores_gemma":[0.0007702318,0.002304183,0.9165538,0.00005703393,0.00002965259,0.00002639306,0.001120376,5.371531e-8,0.02235378,0.0001415578,0.05643328,0.0002096739],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9852068,0.01150147,0.00002049792,0.0002254333,0.00005478853,0.0007115603,0.0002260503,0.00009153821,0.001961905],"genre_scores_gemma":[0.9948497,0.0007478817,0.00009234091,0.00006825617,0.00005697957,0.0002348713,0.000413609,0.00003443199,0.003501914],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1276815,"threshold_uncertainty_score":0.9999349,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07118601312083404,"score_gpt":0.376753761093591,"score_spread":0.305567747972757,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}