{"id":"W1994897438","doi":"10.1007/s00438-008-0388-4","title":"Isolation and characterization of conserved non-coding sequences among rice (Oryza sativa L.) paralogous regions","year":2008,"lang":"en","type":"article","venue":"Molecular Genetics and Genomics","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"Biology; Oryza sativa; Gene; Gene duplication; Genome; Genetics; Arabidopsis; Arabidopsis thaliana; Whole genome sequencing; Coding region; Oryza; Computational biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005219425,0.00009325845,0.0001218925,0.00001271354,0.0001985755,0.0000231722,0.00006139065,0.00006924446,0.000008441504],"category_scores_gemma":[0.000008751218,0.00005149146,0.00003004572,0.0001146662,0.0001213671,0.00003064496,0.0000465558,0.00004048234,9.416436e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006906795,"about_ca_system_score_gemma":0.00001190626,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001050476,"about_ca_topic_score_gemma":0.00008174503,"domain_scores_codex":[0.9994192,0.00002812258,0.0001808297,0.000184253,0.00007216048,0.0001154669],"domain_scores_gemma":[0.9996977,0.00003221127,0.0001092876,0.00004557591,0.00005267807,0.00006247765],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000004132729,0.00001430737,0.02162471,0.000005039532,0.00001003046,0.000003239548,0.0002801492,0.0000248064,0.9765798,0.0001746991,0.000001761413,0.001277297],"study_design_scores_gemma":[0.0001267651,0.0001116767,0.9315069,0.000009625249,0.00002117277,0.00002835861,0.00006411789,0.003048554,0.0638206,0.0008602096,0.0002629953,0.0001390477],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979883,0.00023832,0.001158215,0.0002981568,0.00003212973,0.0001584121,0.00003402573,0.000008880445,0.00008355323],"genre_scores_gemma":[0.9977457,0.001181031,0.0008559696,0.0000794672,0.00003738217,0.000005528127,0.00007064177,0.000001316509,0.00002296837],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9127592,"threshold_uncertainty_score":0.2099761,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01613216540481578,"score_gpt":0.193015421512244,"score_spread":0.1768832561074283,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}