{"id":"W1996186501","doi":"10.1002/prot.10311","title":"Deep trefoil knot implicated in RNA binding found in an archaebacterial protein","year":2002,"lang":"en","type":"article","venue":"Proteins Structure Function and Bioinformatics","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":false,"ca_institutions":"Ontario Institute for Cancer Research; University of Toronto","funders":"National Institute of General Medical Sciences","keywords":"National laboratory; Library science; Physics; Computer science; Engineering physics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000871435,0.0001889091,0.0001673639,0.0001281665,0.00008551196,0.00005255176,0.00009440904,0.0001684251,0.00003258755],"category_scores_gemma":[0.00002836938,0.0001606282,0.00002667108,0.0001786627,0.00006372948,0.000007879242,0.00008454252,0.0001270093,0.000003088874],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002255091,"about_ca_system_score_gemma":0.00001537289,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002785599,"about_ca_topic_score_gemma":0.0006405792,"domain_scores_codex":[0.9990641,0.00003174203,0.0003415933,0.0002104382,0.00008853274,0.0002635432],"domain_scores_gemma":[0.9995804,0.000003195127,0.0001040565,0.0001982564,0.00004342652,0.00007068876],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001810486,0.00005586148,0.006242375,0.0001012516,0.00002575575,0.000001090683,0.000723132,0.0001019718,0.9467966,0.0001064806,0.00001426714,0.0456502],"study_design_scores_gemma":[0.02359289,0.01016577,0.4858089,0.0003823678,0.0001350177,0.0002107802,0.00452914,0.09290677,0.3416173,0.006319164,0.02974207,0.004589824],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980479,0.0002206821,0.0006338661,0.00006420342,0.0001158611,0.0006151656,0.00002089683,0.000006572425,0.0002748678],"genre_scores_gemma":[0.9960078,0.00006306105,0.003531378,0.000082739,0.0001302214,0.00005267473,0.00006686715,0.00001370458,0.0000515304],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6051793,"threshold_uncertainty_score":0.6550227,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01313802705627071,"score_gpt":0.2137315082688256,"score_spread":0.2005934812125549,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}