{"id":"W1996425563","doi":"10.1093/nar/gkq935","title":"Determinants of R-loop formation at convergent bidirectionally transcribed trinucleotide repeats","year":2010,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"Genetic Neurodegenerative Diseases","field":"Neuroscience","cited_by":140,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"Canadian Institutes of Health Research; National Cancer Institute; University of East Anglia; Wellcome Trust","keywords":"Trinucleotide repeat expansion; Biology; Transcription (linguistics); Genetics; DNA; DNA supercoil; RNA polymerase III; RNA polymerase; Molecular biology; DNA replication; RNA; Gene; Allele","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002791782,0.0002751175,0.0001466411,0.0001718785,0.0001426486,0.000260111,0.0001739684,0.0002984503,0.000955108],"category_scores_gemma":[0.0008895298,0.0001469034,0.000215642,0.00005908389,0.0003615804,0.0001918382,0.0001991873,0.0003904254,0.0006908466],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002312346,"about_ca_system_score_gemma":0.000156826,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002531689,"about_ca_topic_score_gemma":0.0004410725,"domain_scores_codex":[0.9997188,0.00006480233,0.00001695027,0.00008382944,0.00006754017,0.00004802657],"domain_scores_gemma":[0.9991177,0.0004071494,0.0001991349,0.00009172213,0.00009353118,0.00009077517],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005122262,0.000008366233,0.0007547494,0.0000131607,0.000002207727,0.0001322972,0.00002635126,0.00006369872,0.9977428,0.0002037399,0.0000132486,0.0009880022],"study_design_scores_gemma":[0.00001537228,0.0002479598,0.007795691,0.000008619959,0.000009834214,0.0009916498,0.00004068277,0.00105904,0.9887948,0.0002921722,0.0007332722,0.00001099213],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9935135,0.0003472441,0.004080899,0.00003609936,0.00001019732,0.00002030839,0.00006099857,0.00008504675,0.001845678],"genre_scores_gemma":[0.9974794,0.00006310076,0.001898851,0.00001388517,0.000004857142,0.000009822371,0.0001048702,0.00001600471,0.0004091685],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.000955108,"threshold_uncertainty_score":0.003195167,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08121788082482514,"score_gpt":0.3565829609802484,"score_spread":0.2753650801554233,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}