{"id":"W1997403449","doi":"10.1371/journal.pone.0055066","title":"A Molecular Phylogeny for Yponomeutoidea (Insecta, Lepidoptera, Ditrysia) and Its Implications for Classification, Biogeography and the Evolution of Host Plant Use","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Lepidoptera: Biology and Taxonomy","field":"Biochemistry, Genetics and Molecular Biology","cited_by":98,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Oulun Yliopisto; Universidad de Costa Rica; Chungbuk National University; Sun Yat-sen University; Commonwealth Scientific and Industrial Research Organisation; Syngenta International; University of Maryland; National Museum of Nature and Science; Florida Museum of Natural History; National Sun Yat-sen University; National Science Foundation","keywords":"Biology; Monophyly; Phylogenetics; Phylogenetic tree; Evolutionary biology; Taxon; Clade; Taxonomic rank; Zoology; Ecology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001362247,0.0001201001,0.0001811781,0.00005231388,0.0001232403,0.0000241416,0.0001076918,0.0001305556,0.000002052805],"category_scores_gemma":[0.0001633843,0.00009292102,0.00007666245,0.00005823125,0.0001989413,0.00001125003,0.00004391669,0.00004152898,0.000001184846],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007270547,"about_ca_system_score_gemma":0.00002694545,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000622172,"about_ca_topic_score_gemma":0.00001389629,"domain_scores_codex":[0.9992576,0.00004762671,0.0002108714,0.0002882179,0.0000331686,0.0001625387],"domain_scores_gemma":[0.9992031,0.0001347107,0.0001361968,0.0002548953,0.0002224341,0.0000485887],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002178982,0.0002285607,0.04683555,0.00008612689,0.0004341794,2.558818e-8,0.00003560353,5.003496e-7,0.9439113,0.007224195,0.00007766738,0.0009483827],"study_design_scores_gemma":[0.009716896,0.001798147,0.4612767,0.0001483886,0.001113431,0.00001619915,0.0002362,0.003957547,0.4976743,0.008231014,0.01472012,0.001111081],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9892548,0.002354339,0.004617027,0.001415235,0.00001750579,0.001699754,0.0004311955,0.000008010179,0.0002021096],"genre_scores_gemma":[0.9958169,0.0002867588,0.001813934,0.0002029671,0.00006967907,0.001462718,0.0003008033,0.00001085559,0.00003540797],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4462371,"threshold_uncertainty_score":0.3789209,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03362684052390102,"score_gpt":0.2181887906439596,"score_spread":0.1845619501200586,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}