{"id":"W1997659215","doi":"10.3390/v4060940","title":"Analysis of Sequence Polymorphism and Population Structure of Tomato chlorotic dwarf viroid and Potato spindle tuber viroid in Viroid-Infected Tomato Plants","year":2012,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Potato spindle tuber viroid; Viroid; Biology; Genetics; Population; Nucleic acid sequence; Virology; Plant virus; Gene; Virus","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001672928,0.0001864725,0.0004779907,0.0001479684,0.00009452674,0.00002654266,0.0001311408,0.0001066766,0.000102037],"category_scores_gemma":[0.0001109817,0.00008588163,0.00005461182,0.0007588242,0.0001475469,0.0004187289,0.0001226904,0.0001023016,0.00000260541],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002516461,"about_ca_system_score_gemma":0.000005382376,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006580276,"about_ca_topic_score_gemma":0.005377166,"domain_scores_codex":[0.9986192,0.0001139952,0.0003508037,0.0002576214,0.0003098202,0.0003485486],"domain_scores_gemma":[0.9993385,0.000263496,0.0001627951,0.00008001531,0.00003277954,0.0001224077],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003799217,0.00004118051,0.3542634,0.00001493719,0.00008217115,0.000001813193,0.0001658805,0.000008958044,0.6443008,0.00002579509,0.000008730543,0.001048279],"study_design_scores_gemma":[0.0001289963,0.00007436211,0.8517601,0.00003357597,0.00006588401,0.000009111233,0.0001439834,0.0001763627,0.1473941,0.00005137059,0.00002291414,0.0001391736],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997228,0.001333647,3.723075e-7,0.00004367764,0.00002661878,0.0002038215,0.001120183,0.00002641833,0.00001731911],"genre_scores_gemma":[0.9994055,0.0003537853,0.00003196667,0.00007120806,0.00003174445,0.000005483325,0.0000925862,0.00000174334,0.000005969155],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4974968,"threshold_uncertainty_score":0.9947454,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0380543860406777,"score_gpt":0.2808608000536735,"score_spread":0.2428064140129958,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}