{"id":"W1997703164","doi":"10.1142/9789814644730_0034","title":"KLEAT: CLEAVAGE SITE ANALYSIS OF TRANSCRIPTOMES","year":2014,"lang":"en","type":"article","venue":"","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre","funders":"National Cancer Institute; National Human Genome Research Institute; Canadian Institutes of Health Research","keywords":"Computer science; Cleavage (geology); Geology; Paleontology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002203832,0.0001037876,0.0002018971,0.0001990303,0.00002888962,0.00001095286,0.0001727185,0.0001313487,0.0002186771],"category_scores_gemma":[0.00004758848,0.00009681956,0.000252747,0.0004792497,0.00005403961,0.000001549575,0.0000524625,0.00006949734,0.0000148611],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008079902,"about_ca_system_score_gemma":0.00002768665,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000078891,"about_ca_topic_score_gemma":0.000204039,"domain_scores_codex":[0.9990531,0.00007262405,0.0001779055,0.0002870697,0.0002011847,0.0002081439],"domain_scores_gemma":[0.9993485,0.000009007195,0.00004026608,0.0004454052,0.00007832751,0.00007854082],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000503909,0.00003192118,0.0002209162,0.00001003865,0.0005895275,6.018469e-7,0.00002757933,0.0004948673,0.9939607,0.0005564633,0.0009389799,0.003117979],"study_design_scores_gemma":[0.0003694672,0.0002355345,0.001903365,0.000002961963,0.0002822383,0.000001141019,0.00002258039,0.00241454,0.9700039,0.00002892764,0.0246063,0.0001290484],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5568858,0.0004394098,0.4146906,0.00016822,0.00008794213,0.0001852607,0.00003933784,0.00002472458,0.02747871],"genre_scores_gemma":[0.9968216,0.0000965464,0.0007349142,0.0002154597,0.00004152572,0.000007627895,0.0001309004,0.00001675227,0.001934653],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4399358,"threshold_uncertainty_score":0.3948187,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006202037887898372,"score_gpt":0.258560351068902,"score_spread":0.2523583131810036,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}