{"id":"W1997720987","doi":"10.1016/j.jprot.2015.03.017","title":"Quantitative changes in proteins responsible for flavonoid and anthocyanin biosynthesis in strawberry fruit at different ripening stages: A targeted quantitative proteomic investigation employing multiple reaction monitoring","year":2015,"lang":"en","type":"article","venue":"Journal of Proteomics","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":false,"ca_institutions":"Acadia University; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Anthocyanin; Ripening; Chalcone synthase; Chalcone isomerase; Biochemistry; Flavonoid biosynthesis; Flavonoid; Phenylalanine ammonia-lyase; 1-Methylcyclopropene; Chemistry; Anthocyanidin; Biosynthesis; Biology; Phenylalanine; Food science; Enzyme; Amino acid; Transcriptome; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001608638,0.0004075203,0.0002966735,0.0003066319,0.0002906759,0.0003289299,0.0001816275,0.000294184,0.0009502803],"category_scores_gemma":[0.00012937,0.0002357635,0.0003257226,0.0002756702,0.0002304997,0.00050075,0.0001587815,0.0005108916,0.0002546859],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003127201,"about_ca_system_score_gemma":0.0002159192,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000734535,"about_ca_topic_score_gemma":0.00151478,"domain_scores_codex":[0.9998976,0.000007891933,0.000006178767,0.00004269464,0.00002154505,0.00002403826],"domain_scores_gemma":[0.9998792,0.0000245845,0.00002574645,0.000008564968,0.00002885862,0.00003305595],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008667119,0.000009008661,0.0002174504,0.00001591539,0.000003756486,0.00001450485,0.00001509919,0.000008002916,0.9992372,0.0000178889,0.000009742664,0.0003646995],"study_design_scores_gemma":[0.00001219842,0.0002161386,0.07622136,0.000003485196,0.00005447793,0.0001884186,0.00008327357,0.0008413834,0.9214856,0.00005019939,0.0008323955,0.00001095901],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9937347,0.000992146,0.003425586,0.00005822497,0.00002579773,0.00003149382,0.0009380818,0.0000517993,0.0007421683],"genre_scores_gemma":[0.983657,0.0007597368,0.007712491,0.0001303567,0.00002654646,0.000152962,0.002142705,0.00004199458,0.0053763],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009502803,"threshold_uncertainty_score":0.003179014,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0630273654640348,"score_gpt":0.312747148326715,"score_spread":0.2497197828626802,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}