{"id":"W1997724250","doi":"10.1093/molbev/msu280","title":"Evolution of High Mobility Group Nucleosome-Binding Proteins and Its Implications for Vertebrate Chromatin Specialization","year":2014,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":48,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria","funders":"Canadian Institutes of Health Research","keywords":"Biology; Evolutionary biology; Vertebrate; Lineage (genetic); Functional divergence; Chromatin; Molecular evolution; Negative selection; Phylogenetics; Nucleosome; Genetics; Gene; Genome; Gene family","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003696725,0.0001424848,0.0001770315,0.0005883827,0.0003703022,0.000337038,0.0002649427,0.0005449101,0.0005923476],"category_scores_gemma":[0.0003904657,0.0001293341,0.0001905612,0.0004716154,0.0005171201,0.0004530712,0.000439979,0.0002263262,0.0002040793],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004933242,"about_ca_system_score_gemma":0.0002515451,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001039129,"about_ca_topic_score_gemma":0.001892602,"domain_scores_codex":[0.9998264,0.00003698394,0.00001311311,0.00006056704,0.00003226455,0.0000306945],"domain_scores_gemma":[0.9997684,0.00005715793,0.0000753795,0.00002684217,0.00002680768,0.0000453946],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.0003065892,0.00003580065,0.1540105,0.0001199193,0.00005379919,0.0006424723,0.0006695464,0.001849439,0.8143759,0.004028105,0.00007974971,0.0238282],"study_design_scores_gemma":[0.00001296992,0.0001472915,0.961427,0.00003407905,0.00005017386,0.001385295,0.0003773449,0.004908565,0.02545417,0.002949149,0.003227613,0.00002646822],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962913,0.001001937,0.001497186,0.00007234285,0.000002475266,0.000003006995,0.00004069805,0.000009811196,0.00108122],"genre_scores_gemma":[0.9983193,0.0005150561,0.0008101619,0.00003361972,0.000007192464,0.000002592623,0.00006271306,0.000004939727,0.0002443307],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001039129,"threshold_uncertainty_score":0.003579259,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004862942871147175,"score_gpt":0.2292012754245389,"score_spread":0.2243383325533918,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}