{"id":"W1997984718","doi":"10.1186/1756-0500-7-727","title":"Investigating genome reduction of Bordetella pertussis using a multiplex PCR-based reverse line blot assay (mPCR/RLB)","year":2014,"lang":"en","type":"article","venue":"BMC Research Notes","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Health and Medical Research Council; Centers for Disease Control and Prevention; Medical Research Council; Public Health Agency; Public Health Agency of Canada","keywords":"Bordetella pertussis; Whooping cough; Biology; Multiplex polymerase chain reaction; Gene; Genome; Multiplex; Microbiology; Genetics; Polymerase chain reaction; Virology; Bacteria","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005804791,0.0007700124,0.000430924,0.000906096,0.0002288998,0.0004541494,0.0004582151,0.0005648084,0.00172053],"category_scores_gemma":[0.0008137379,0.0003487384,0.0005013831,0.0006208452,0.0002562203,0.0002765531,0.0002755464,0.0009832967,0.001224585],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003412017,"about_ca_system_score_gemma":0.0001772349,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005369467,"about_ca_topic_score_gemma":0.0009097444,"domain_scores_codex":[0.9989136,0.0001526896,0.00006471873,0.0004589969,0.0003205978,0.00008946955],"domain_scores_gemma":[0.9994273,0.0002162006,0.0001602062,0.00006857605,0.00009132559,0.00003636702],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005601396,0.00004280819,0.0008557898,0.00004984389,0.00001029525,0.00001572721,0.00003313508,0.00006512374,0.9962304,0.00002851263,0.00004873335,0.002563557],"study_design_scores_gemma":[0.00001263413,0.0005556358,0.01929926,0.00001300197,0.00006699889,0.000372468,0.00006186937,0.003688105,0.9735221,0.00005800759,0.002335868,0.0000140832],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.829912,0.001498042,0.1564364,0.0003458301,0.0001052616,0.0004703708,0.006239471,0.001574891,0.003417683],"genre_scores_gemma":[0.6862589,0.001503718,0.2918179,0.0005426613,0.00005186168,0.001312786,0.01060491,0.0002540498,0.007653233],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00172053,"threshold_uncertainty_score":0.005755723,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2030821198306316,"score_gpt":0.38535427618467,"score_spread":0.1822721563540384,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}