{"id":"W1998352493","doi":"10.1182/blood-2013-05-500595","title":"Genome-wide copy-number analyses reveal genomic abnormalities involved in transformation of follicular lymphoma","year":2013,"lang":"en","type":"article","venue":"Blood","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":135,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; BC Cancer Agency","funders":"National Cancer Institute","keywords":"Follicular lymphoma; Biology; Genome; Genetics; Copy number analysis; Lymphoma; Computational biology; Comparative genomic hybridization; Copy-number variation; Gene; Immunology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001012186,0.0001523617,0.0003888045,0.000114502,0.0000290996,0.00001669943,0.00006265588,0.00007840203,0.0002579505],"category_scores_gemma":[0.0000183504,0.0001219399,0.0001511924,0.0001698886,0.00004159311,0.0001632319,0.0000148989,0.00002980722,0.0001340193],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001096583,"about_ca_system_score_gemma":0.00009222668,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001720735,"about_ca_topic_score_gemma":0.00008215101,"domain_scores_codex":[0.9989404,0.000042771,0.0004510984,0.0001613338,0.0001837961,0.0002206004],"domain_scores_gemma":[0.9994476,0.00005904509,0.00009588358,0.0002299048,0.0000774574,0.00009014281],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00003670848,0.001446728,0.9874179,0.000168113,0.0003673923,0.00004254169,0.001241692,0.00001622389,0.008294161,0.0001356154,0.00008718048,0.0007457389],"study_design_scores_gemma":[0.007772547,0.0001365036,0.9229388,0.00007991157,0.0003643167,0.00002915527,0.0004705722,0.00002521619,0.06766438,0.0001431967,0.0002625066,0.000112935],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952132,0.0009398197,0.00001017504,0.0002239656,0.00002300237,0.0005594073,0.00001327018,0.00002480193,0.002992334],"genre_scores_gemma":[0.9987089,0.0002805296,0.0004083992,0.0001920838,0.00003507272,0.0001490673,0.00009956364,0.00001481504,0.0001115786],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06447915,"threshold_uncertainty_score":0.4972565,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02272787639679912,"score_gpt":0.2684191870169629,"score_spread":0.2456913106201637,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}