{"id":"W1999413374","doi":"10.1042/bj20101986","title":"Mechanistic studies on the enzymatic processing of fluorinated methionine analogues by <i>Trichomonas vaginalis</i> methionine γ-lyase","year":2011,"lang":"en","type":"article","venue":"Biochemical Journal","topic":"Polyamine Metabolism and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Waterloo","funders":"","keywords":"Enzyme; Chemistry; Lyase; Biochemistry; Trichomonas vaginalis; Methionine; Cofactor; Stereochemistry; Amino acid; Biology; Microbiology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005865463,0.0001947865,0.0002516673,0.00005577131,0.0001777156,0.00002087996,0.0003707714,0.0001098167,0.00002377986],"category_scores_gemma":[0.0006269947,0.0001225693,0.0001108804,0.0002502804,0.00020033,0.000005958194,0.00009913409,0.0002525187,0.000005454689],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001330241,"about_ca_system_score_gemma":0.00006730875,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005987511,"about_ca_topic_score_gemma":5.754184e-7,"domain_scores_codex":[0.9987391,0.0001254827,0.0004362194,0.0002352859,0.0002345585,0.0002293093],"domain_scores_gemma":[0.9989372,0.00005003849,0.0003211247,0.0002819858,0.0002931001,0.0001165363],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005533349,0.0001717806,0.00001870232,0.00002532037,0.00009716849,0.000002238088,0.0001309421,7.82632e-7,0.9864388,0.001584943,0.01056091,0.0009131331],"study_design_scores_gemma":[0.000298653,0.0001717908,0.00005284428,0.00004888502,0.0001220692,0.0000577279,0.0002374843,0.00002800009,0.9940158,0.002782024,0.002038352,0.0001464202],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9712943,0.0186234,0.008396221,0.0007498504,0.0001830391,0.0002131149,0.00005953869,0.000018457,0.000462119],"genre_scores_gemma":[0.994639,0.000641178,0.003843274,0.0003902706,0.0002073739,0.00002912025,0.00004717094,0.00001955404,0.0001829975],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02334481,"threshold_uncertainty_score":0.4998231,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05256384612368119,"score_gpt":0.2970285721278244,"score_spread":0.2444647260041432,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}