{"id":"W2000265342","doi":"10.1101/pdb.prot080242","title":"Immunostaining for Markers of Apoptosis in the <i>Caenorhabditis elegans</i> Germline","year":2014,"lang":"en","type":"article","venue":"Cold Spring Harbor Protocols","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Caenorhabditis elegans; Germline; Immunostaining; Biology; Model organism; Cell biology; Somatic cell; Apoptosis; Mutant; Immunofluorescence; Antibody; Molecular biology; Genetics; Immunohistochemistry; Gene; Immunology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009471047,0.0001701007,0.0002196287,0.00004859381,0.00008466009,0.00004171038,0.000471227,0.0001227025,0.000005217791],"category_scores_gemma":[0.0002324633,0.000151824,0.000114948,0.000092061,0.0000794076,0.00000486881,0.00008639327,0.0001106431,0.000001648526],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001387374,"about_ca_system_score_gemma":0.00005942634,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004101469,"about_ca_topic_score_gemma":0.00001726911,"domain_scores_codex":[0.9987565,0.0001082414,0.0003532151,0.0003081058,0.0001543508,0.0003195815],"domain_scores_gemma":[0.9990526,0.0000607868,0.0001589738,0.00058549,0.0001011251,0.00004097136],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001481314,0.0001077138,0.003363817,0.0001969197,0.0000307278,3.677602e-7,0.0001381312,0.0001967039,0.9929187,0.00190561,0.0004160245,0.0005771177],"study_design_scores_gemma":[0.001412343,0.000815844,0.008565856,0.0001048594,0.00001980196,5.044239e-7,0.0000499624,0.0003773208,0.8780279,0.00007152316,0.1102933,0.000260732],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9084359,0.0001514305,0.0431747,0.0003897037,0.000130771,0.0472467,0.00003031567,0.00002793239,0.0004124976],"genre_scores_gemma":[0.9681866,0.00001238893,0.003959761,0.0003854032,0.0001946892,0.02716642,0.000005290046,0.00003754156,0.00005196808],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1148908,"threshold_uncertainty_score":0.6191203,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01109192968917501,"score_gpt":0.2547063739356347,"score_spread":0.2436144442464597,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}