{"id":"W2000354677","doi":"10.1128/mbio.01886-14","title":"<i>Salmonella</i> Evades <scp>d</scp> -Amino Acid Oxidase To Promote Infection in Neutrophils","year":2014,"lang":"en","type":"article","venue":"mBio","topic":"Amino Acid Enzymes and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Salmonella; Microbiology; Pathogen; Biology; Bacteria; Immune system; Oxidase test; Intracellular; Intracellular parasite; Salmonella infection; Enzyme; Immunology; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001828141,0.0003592308,0.0001716722,0.00008153098,0.00009241381,0.0002207166,0.0002335666,0.0003110601,0.001379457],"category_scores_gemma":[0.00009211696,0.00008302371,0.0002110414,0.00007369338,0.0002665264,0.0001401403,0.0002259399,0.0004320833,0.0005449069],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002690104,"about_ca_system_score_gemma":0.0001513715,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000365821,"about_ca_topic_score_gemma":0.0005151311,"domain_scores_codex":[0.9998512,0.00003213392,0.00001740141,0.00002544593,0.00003956885,0.00003423967],"domain_scores_gemma":[0.9998751,0.0000197205,0.00004813845,0.00001555118,0.00001605379,0.0000254459],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001497039,0.00002013945,0.0002841151,0.00003791216,0.000003820956,0.0000413625,0.000005404014,0.00003676251,0.9985972,0.00007040992,0.00006113914,0.0006919115],"study_design_scores_gemma":[0.00001915932,0.0003732144,0.004914195,0.00001046757,0.000009889141,0.0004953342,0.00002609311,0.0006948287,0.9905307,0.00003099088,0.002891769,0.000003397852],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9886608,0.00252246,0.005251929,0.0004568696,0.00006229663,0.00004282275,0.0003887128,0.0001647435,0.002449268],"genre_scores_gemma":[0.9944263,0.0006334601,0.002293016,0.0001102754,0.00001281621,0.00002910463,0.000412721,0.00001982253,0.002062458],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001379457,"threshold_uncertainty_score":0.00461477,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006851923485771226,"score_gpt":0.2269674695551136,"score_spread":0.2201155460693423,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}