{"id":"W2000486602","doi":"10.3835/plantgenome2014.03.0010","title":"A SNP Genotyping Array for Hexaploid Oat","year":2014,"lang":"en","type":"article","venue":"The Plant Genome","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":79,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; General Mills; Agricultural Research Service; National Institute of Food and Agriculture; Prairie Oat Growers Association; U.S. Department of Agriculture","keywords":"Biology; Molecular Inversion Probe; Single-nucleotide polymorphism; SNP genotyping; Genetics; Genotyping; SNP array; SNP; Computational biology; Avena; Mendelian inheritance; Population; Tag SNP; Genotype; Gene; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001045229,0.0004796103,0.0007619918,0.0009007436,0.0004336828,0.0006139571,0.0007469744,0.0005889929,0.004518265],"category_scores_gemma":[0.001436107,0.0005598,0.000753871,0.001081838,0.0001601865,0.000284798,0.0005730038,0.0006075769,0.003040351],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000424044,"about_ca_system_score_gemma":0.0007516547,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001254559,"about_ca_topic_score_gemma":0.003652344,"domain_scores_codex":[0.998107,0.000280611,0.0001600929,0.0008821413,0.0004521515,0.000117998],"domain_scores_gemma":[0.9993333,0.0001668141,0.00007792142,0.0001657573,0.0001691906,0.00008697324],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004816006,0.00008476773,0.006765396,0.0001306441,0.00009847653,0.00008598496,0.00005427991,0.001719052,0.9268262,0.0007957229,0.003168689,0.05978916],"study_design_scores_gemma":[0.0003878646,0.001803895,0.1742766,0.00006776511,0.0006235373,0.001944535,0.00006698098,0.04172154,0.6694096,0.002317718,0.1071732,0.0002067875],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.384944,0.001680703,0.53425,0.0004991572,0.0004902995,0.001119883,0.05152734,0.008690455,0.01679816],"genre_scores_gemma":[0.198768,0.0005301723,0.7223448,0.0005219951,0.00008355134,0.001543466,0.05913955,0.0005470323,0.01652129],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.004518265,"threshold_uncertainty_score":0.01511514,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03891104473260029,"score_gpt":0.2086082643845457,"score_spread":0.1696972196519454,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}