{"id":"W2000502273","doi":"10.1139/gen-2014-0178","title":"Identification of functional candidates amongst hypothetical proteins of <i>Mycobacterium leprae</i> Br4923, a causative agent of leprosy","year":2015,"lang":"en","type":"article","venue":"Genome","topic":"Leprosy Research and Treatment","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Mycobacterium leprae; Biology; Leprosy; Virulence; Computational biology; Function (biology); Genome; Genetics; Obligate; In silico; Hypothetical protein; Whole genome sequencing; Phenotype; Microbiology; Gene; Immunology","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000327973,0.0001083839,0.0003146568,0.000107234,0.00001979511,0.000005420674,0.00006733216,0.00005596826,0.00007867687],"category_scores_gemma":[0.0001486238,0.00008414119,0.00008851563,0.0001847319,0.0002284789,0.00005812819,0.00005040571,0.00008508759,0.00004307653],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001292117,"about_ca_system_score_gemma":0.000344143,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002267921,"about_ca_topic_score_gemma":0.0000254911,"domain_scores_codex":[0.9986031,0.00005076213,0.0004295474,0.0002145762,0.0005141805,0.0001878435],"domain_scores_gemma":[0.9987407,0.00002990952,0.0002087736,0.0003342162,0.0005007832,0.0001856489],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009930643,0.0009517845,0.05330243,0.0002723789,0.0002572013,0.00001642779,0.00099458,0.00001124926,0.9424833,0.0002921648,0.0001143407,0.0003110886],"study_design_scores_gemma":[0.003599111,0.002210568,0.4605202,0.00006843766,0.0001682616,0.0000517512,0.0003598893,0.00008959653,0.5316265,0.0005488395,0.0006378241,0.0001190633],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.99695,0.0003634838,0.0003770718,0.0003058529,0.00006072581,0.0008787502,0.0001983033,0.00001180179,0.0008539996],"genre_scores_gemma":[0.9984459,0.00002024559,0.0002974545,0.00001034397,0.00005704696,0.00008138432,0.000125132,0.00001318028,0.0009493239],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4108568,"threshold_uncertainty_score":0.3431178,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03983636676641753,"score_gpt":0.2817955943688858,"score_spread":0.2419592276024683,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}