{"id":"W2001007801","doi":"10.1186/1471-2180-14-173","title":"International Clostridium difficile animal strain collection and large diversity of animal associated strains","year":2014,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":118,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Clostridium difficile; Microbiology; Ribotyping; Parasitology; Transmission (telecommunications); Polymerase chain reaction; Strain (injury); Virology; Zoology; Genetics; Gene; Antibiotics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004762713,0.0001840514,0.0004115135,0.000210636,0.0001883902,0.00001348327,0.0001582666,0.0002683006,0.0005276941],"category_scores_gemma":[0.000500763,0.0001775811,0.0001274645,0.0002306866,0.000206778,0.00004093431,0.0004121298,0.000293009,0.00001706143],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001674821,"about_ca_system_score_gemma":0.0001378864,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001049276,"about_ca_topic_score_gemma":0.00015818,"domain_scores_codex":[0.998545,0.0001641319,0.0003332757,0.0003875856,0.0001523607,0.0004176432],"domain_scores_gemma":[0.9991586,0.0001560585,0.0001455994,0.0001809152,0.000233279,0.0001255325],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009034828,0.0004991333,0.03480431,0.00005127572,0.0001222188,0.000006664699,0.0001613073,6.705721e-7,0.9605651,0.0003315094,0.002236534,0.0003177921],"study_design_scores_gemma":[0.01476024,0.007757056,0.3020872,0.0001374685,0.0003061777,0.0003740951,0.001046323,0.002670891,0.6506078,0.00004755983,0.01955196,0.0006532177],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957436,0.00006032201,0.0001505381,0.0004565236,0.0001602439,0.0002935529,0.0007806058,0.00005076976,0.002303831],"genre_scores_gemma":[0.9985704,0.0000596055,0.0001723219,0.00007025572,0.0001655734,0.000004437817,0.0004704309,0.00001650508,0.0004704681],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3099573,"threshold_uncertainty_score":0.7241545,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02612362849036068,"score_gpt":0.2820580026165239,"score_spread":0.2559343741261632,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}