{"id":"W2001568767","doi":"10.1021/pr5010604","title":"Adaptation of <i>Leishmania donovani</i> to Cutaneous and Visceral Environments: in Vivo Selection and Proteomic Analysis","year":2014,"lang":"en","type":"article","venue":"Journal of Proteome Research","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University Health Centre; McGill University","funders":"Canadian Institutes of Health Research; Universidade de São Paulo; National Research Council Sri Lanka","keywords":"Visceral leishmaniasis; Leishmania donovani; Biology; Leishmaniasis; Leishmania; Cutaneous leishmaniasis; Immunology; Parasite hosting","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003537054,0.0001237896,0.0005721855,0.001881724,0.00009692337,0.000044242,0.000112924,0.00007957063,0.00004891663],"category_scores_gemma":[0.001232637,0.00009993156,0.00007508091,0.001273791,0.0001560056,0.0001857027,0.0001299747,0.0006382753,0.000003214307],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002700597,"about_ca_system_score_gemma":0.0001120023,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003047091,"about_ca_topic_score_gemma":0.0002491995,"domain_scores_codex":[0.9971013,0.0004547777,0.0005958493,0.0002500511,0.001220738,0.0003772694],"domain_scores_gemma":[0.9987765,0.0002082874,0.0001976578,0.0001553963,0.0004107281,0.0002514632],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.002274531,0.0003361445,0.1662524,0.0003462278,0.0005955031,0.00008046416,0.001261405,0.0006076351,0.8172158,0.00006164927,0.0002235594,0.01074466],"study_design_scores_gemma":[0.007147397,0.01874861,0.7968754,0.0009170168,0.0004808563,0.001337504,0.001914045,0.02489684,0.140939,0.0009460274,0.00536815,0.0004291757],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9944864,0.000212437,0.002178292,0.001760474,0.00001138539,0.001162023,0.000002229904,0.000003339137,0.0001834236],"genre_scores_gemma":[0.992555,0.0006303489,0.006234549,0.00002480398,0.0001047845,0.00004872151,4.217542e-7,0.00001711766,0.00038428],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6762768,"threshold_uncertainty_score":0.4075091,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03628165070673998,"score_gpt":0.3434511701186857,"score_spread":0.3071695194119457,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}