{"id":"W2001725958","doi":"10.1038/nature07484","title":"The diploid genome sequence of an Asian individual","year":2008,"lang":"en","type":"article","venue":"Nature","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":960,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"National Human Genome Research Institute; National Key Research and Development Program of China; Beijing Municipal Science and Technology Commission; National High-tech Research and Development Program; Chinese Academy of Sciences; Shenzhen University; H. Lundbeck A/S; Lundbeckfonden; National Natural Science Foundation of China; Wellcome Trust","keywords":"International HapMap Project; dbSNP; Genome; Genetics; Biology; Reference genome; Personal genomics; Haplotype; Whole genome sequencing; SNP genotyping; Structural variation; Genomics; Computational biology; Genotyping; DNA sequencing; Single-nucleotide polymorphism; 1000 Genomes Project; Human genome; Gene; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008496171,0.00007819691,0.00007110761,0.00001011638,0.0001644101,0.000006132877,0.0002666248,0.0003344944,0.000001990099],"category_scores_gemma":[0.00003158226,0.00005434171,0.00004334001,0.00004518823,0.0001351959,4.171585e-7,0.00008927538,0.0002538885,0.000001279199],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000002987831,"about_ca_system_score_gemma":0.0000447095,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003860464,"about_ca_topic_score_gemma":0.00002399875,"domain_scores_codex":[0.9994972,0.00002346978,0.00009214583,0.0001534626,0.0001014051,0.0001322578],"domain_scores_gemma":[0.9995866,0.000006307645,0.00004673624,0.0002635811,0.0000618479,0.00003487747],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002128017,0.00001942265,0.00186048,0.000003005575,0.00005804803,0.00000286606,0.0002232751,0.00001336947,0.9957457,0.0001686462,0.0003385429,0.001545326],"study_design_scores_gemma":[0.0004449007,0.0005255687,0.3649117,0.000003584821,0.00002609818,0.0000860263,0.000239228,0.000004946337,0.1666842,0.0005123335,0.4662902,0.0002712131],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9906526,0.007576287,0.000003811312,0.0001878998,0.0001423502,0.00007102114,0.00009321009,0.000001768552,0.001271009],"genre_scores_gemma":[0.9981435,0.0007414939,0.0003508255,0.0002382174,0.0001728063,0.000005024066,0.00005584796,0.000008765277,0.0002835283],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8290616,"threshold_uncertainty_score":0.2579927,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01342598383641455,"score_gpt":0.2515286136748074,"score_spread":0.2381026298383928,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}