{"id":"W2002011422","doi":"10.1089/mdr.2008.0812","title":"Real-Time PCRs and Fingerprinting Assays for the Detection and Characterization of <i>Salmonella</i> Genomic Island-1 Encoding Multidrug Resistance: Application to 445 European Isolates of <i>Salmonella, Escherichia coli, Shigella</i> , and <i>Proteus</i>","year":2008,"lang":"en","type":"article","venue":"Microbial Drug Resistance","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Public Health Agency of Canada","keywords":"Biology; Salmonella; Salmonella enterica; Multiple drug resistance; Microbiology; Shigella; Escherichia coli; Gene; Genetics; Drug resistance; Bacteria","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008364246,0.0002348427,0.0004045115,0.00002603678,0.0004571755,0.00003551655,0.0002032194,0.0000963769,0.0000038336],"category_scores_gemma":[0.00009024786,0.0001298043,0.0000673442,0.0002501651,0.000226859,0.00009298119,0.0001259781,0.0001186483,0.000002144503],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002478126,"about_ca_system_score_gemma":0.000009367584,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000204229,"about_ca_topic_score_gemma":0.0006795569,"domain_scores_codex":[0.9982746,0.0002320994,0.0005616518,0.0005383468,0.00009163092,0.0003016822],"domain_scores_gemma":[0.9985697,0.0006289394,0.0004643843,0.0001344452,0.000116186,0.00008637035],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003519383,0.00002333033,0.002987882,0.00008223876,0.00001643931,5.80107e-7,0.000647908,0.000006298618,0.9934448,0.00001764066,0.0001446711,0.002276297],"study_design_scores_gemma":[0.0007433189,0.0001257916,0.3185475,0.0002092831,0.00008004007,0.00001559567,0.0002463608,0.0005503963,0.6594565,0.000133987,0.01930398,0.0005872377],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9967619,0.000605272,0.0006702752,0.0005879401,0.00005472225,0.0008948881,0.0001137758,0.00004024708,0.0002709966],"genre_scores_gemma":[0.9963512,0.001900808,0.0007435246,0.0001333716,0.0001416293,0.00004006329,0.00003603147,0.000008775933,0.0006446199],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3339883,"threshold_uncertainty_score":0.5293265,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00876181725909701,"score_gpt":0.1928847317769008,"score_spread":0.1841229145178038,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}