{"id":"W2002171861","doi":"10.1111/j.1467-7652.2009.00416.x","title":"Strategies to mitigate transgene–promoter interactions","year":2009,"lang":"en","type":"article","venue":"Plant Biotechnology Journal","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":58,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; Iogen Corporation; University of Ottawa","funders":"","keywords":"Biology; Promoter; Enhancer; Transgene; Cauliflower mosaic virus; Selectable marker; DNA; Genetics; Gene; Computational biology; Cell biology; Gene expression; Genetically modified crops","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001142301,0.001133422,0.0007419184,0.0005050055,0.0004276267,0.0009334401,0.001025185,0.0009266664,0.001676721],"category_scores_gemma":[0.0008519519,0.0005348445,0.0006989311,0.0003768915,0.0005837309,0.0006722686,0.00138054,0.002496623,0.001215915],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003842274,"about_ca_system_score_gemma":0.0005977038,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003871045,"about_ca_topic_score_gemma":0.001215595,"domain_scores_codex":[0.9989065,0.0001779482,0.0001350994,0.0002673643,0.0003347052,0.0001783438],"domain_scores_gemma":[0.9992439,0.0002051138,0.0001821337,0.0001799119,0.0001017075,0.00008731948],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001735113,0.00003586388,0.00008078066,0.0001079509,0.00001619113,0.00006645546,0.0000387027,0.0001429506,0.9942801,0.0006833283,0.00009556436,0.004434799],"study_design_scores_gemma":[0.00001683047,0.0002294074,0.0005365951,0.00001774928,0.00006330925,0.0004285898,0.00003871139,0.001204298,0.9821216,0.0004006449,0.01492762,0.00001464689],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5453458,0.006448432,0.4312577,0.00113585,0.0005827848,0.001456859,0.000528456,0.002490864,0.01075321],"genre_scores_gemma":[0.7507922,0.006348019,0.2196525,0.001392861,0.000108659,0.001437832,0.001370977,0.000886807,0.01801015],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001676721,"threshold_uncertainty_score":0.006041169,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0107298655580449,"score_gpt":0.2494471335408106,"score_spread":0.2387172679827657,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}