{"id":"W2002212380","doi":"10.1074/mcp.r110.003863","title":"Gold for Ubiquitin in Vancouver","year":2010,"lang":"en","type":"article","venue":"Molecular & Cellular Proteomics","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"National Institute of General Medical Sciences; National Institutes of Health","keywords":"Ubiquitin; Computational biology; Chemistry; Biology; Biochemistry; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004988784,0.00027291,0.0002213036,0.00008728531,0.00005770139,0.00004249987,0.0003785171,0.0003911235,0.0000348664],"category_scores_gemma":[0.0001906145,0.0002961956,0.0001954266,0.000121933,0.00008525897,0.000005761652,0.0001498317,0.0003326903,0.00001870523],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001679652,"about_ca_system_score_gemma":0.0001275909,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002366459,"about_ca_topic_score_gemma":0.0003495412,"domain_scores_codex":[0.9983729,0.00006215162,0.0003237397,0.0005755947,0.0001546237,0.0005110182],"domain_scores_gemma":[0.9990338,0.00001140301,0.0001058959,0.0006193504,0.00009851347,0.0001310219],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001001277,0.00008434709,0.0002744548,0.00004643475,0.00001902721,0.00002007241,0.00003334319,0.00004017243,0.9960601,0.00116936,0.0009042709,0.001248295],"study_design_scores_gemma":[0.00107535,0.0001948044,0.00003567124,0.0000120923,0.00001149685,0.000007919937,0.00002130546,0.000285893,0.9347708,0.001355282,0.06186953,0.0003598786],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9721036,0.0001938427,0.0229849,0.0001093771,0.0004857523,0.001556823,0.00004168367,0.00002773914,0.002496294],"genre_scores_gemma":[0.9671654,0.00001250124,0.02993165,0.0005235066,0.0003152893,0.0005892241,0.0001804744,0.00008857212,0.00119336],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06128932,"threshold_uncertainty_score":0.999949,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007075174867206182,"score_gpt":0.2255985274575477,"score_spread":0.2185233525903416,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}