{"id":"W2002819492","doi":"10.1128/aem.00118-08","title":"Morphology, Genome Sequence, and Structural Proteome of Type Phage P335 from <i>Lactococcus lactis</i>","year":2008,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":57,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Mejeribrugets ForskningsFond","keywords":"Biology; Genetics; Prophage; Siphoviridae; Genome; Lactococcus lactis; Bacteriophage; Lysogenic cycle; Gene; Proteome; Comparative genomics; Genomics; Escherichia coli; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003655735,0.0003412892,0.0001670711,0.0003952862,0.0001741427,0.0002468565,0.0001116441,0.0001811004,0.000806351],"category_scores_gemma":[0.0001263448,0.00009767804,0.0003611493,0.0005447927,0.0001139747,0.0001461604,0.0001227446,0.0002727136,0.0004280136],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002510211,"about_ca_system_score_gemma":0.0001723272,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003712001,"about_ca_topic_score_gemma":0.002047827,"domain_scores_codex":[0.999957,0.000003705015,0.000003218543,0.0000156158,0.00001108767,0.00000940584],"domain_scores_gemma":[0.9999187,0.00001517669,0.00002606508,0.000006130865,0.00000934135,0.00002459534],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000237109,0.00002102777,0.004339389,0.00007601077,0.000007834546,0.0002592556,0.00008321149,0.0001045975,0.9913326,0.00004237141,0.0001296928,0.003367001],"study_design_scores_gemma":[0.00002637276,0.0006713394,0.7264275,0.00004464962,0.0001334258,0.00462276,0.0006246395,0.003738985,0.2500199,0.0001425725,0.01349939,0.00004854126],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9930815,0.0005077826,0.001072823,0.00005679632,0.000005261582,0.00001181161,0.004606323,0.00005711887,0.0006006716],"genre_scores_gemma":[0.9703805,0.0005279166,0.004439256,0.00009215219,0.000010472,0.00002718063,0.02258672,0.00005474493,0.001880924],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003712001,"threshold_uncertainty_score":0.007380784,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009775672174141322,"score_gpt":0.1982346414889621,"score_spread":0.1884589693148208,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}