{"id":"W2003266661","doi":"10.1128/jb.01098-06","title":"Characterization of a Pseudomonad 2-Nitrobenzoate Nitroreductase and Its Catabolic Pathway-Associated 2-Hydroxylaminobenzoate Mutase and a Chemoreceptor Involved in 2-Nitrobenzoate Chemotaxis","year":2007,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Amino Acid Enzymes and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":70,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Research Council Canada; Biotechnology Research Institute","funders":"Institute of Genetics; Kansai University","keywords":"Nitroreductase; Biology; Biochemistry; Flavin mononucleotide; Mutase; Pseudomonas putida; Pseudomonas fluorescens; Escherichia coli; Cofactor; Flavin group; Complementation; Mutant; Enzyme; Bacteria; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009243268,0.0002940901,0.0006982433,0.0003007595,0.00004791188,0.00001624542,0.0001825,0.0003444996,0.00001667698],"category_scores_gemma":[0.0002660198,0.0002699986,0.0001092909,0.0001986308,0.0001568097,0.00003616663,0.0001418261,0.000276651,9.261303e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003177629,"about_ca_system_score_gemma":0.0001272245,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004728511,"about_ca_topic_score_gemma":0.00009679134,"domain_scores_codex":[0.9979972,0.0001475975,0.0009626134,0.000316133,0.0001383944,0.0004381116],"domain_scores_gemma":[0.9983671,0.00003284401,0.0009264402,0.0001817482,0.0002728176,0.0002191025],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006090216,0.0001534911,0.005721043,0.00004964303,0.00009094931,0.00003413746,0.0003223529,0.000001483621,0.9903135,0.00004647688,0.00001481643,0.002643068],"study_design_scores_gemma":[0.002766642,0.0005684686,0.152935,0.00006391272,0.00005654937,0.0002542977,0.0001305953,0.00005367059,0.8412408,0.00005850947,0.00160812,0.0002634688],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973859,0.001837537,0.00009803326,0.00009671345,0.000255013,0.0001975593,0.0001032115,0.000005480525,0.00002051049],"genre_scores_gemma":[0.9970806,0.001927971,0.0002389645,0.0001813164,0.0002712036,0.000004628062,0.0002115792,0.00003527064,0.00004848549],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1490727,"threshold_uncertainty_score":0.9999752,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007255012928901201,"score_gpt":0.2213598198488837,"score_spread":0.2141048069199825,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}