{"id":"W2003317126","doi":"10.1007/s00239-012-9512-5","title":"5S rRNA Gene Arrangements in Protists: A Case of Nonadaptive Evolution","year":2012,"lang":"en","type":"review","venue":"Journal of Molecular Evolution","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"GDG Environnement; University of Ottawa","funders":"","keywords":"Biology; Gene; Genetics; Ribosomal RNA; 18S ribosomal RNA; Concerted evolution; 5S ribosomal RNA; 5.8S ribosomal RNA; Transfer RNA; Eukaryote; Internal transcribed spacer; RNA; 28S ribosomal RNA; Evolutionary biology; Phylogenetics; Non-coding RNA; Ribosome; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006934452,0.0003004662,0.0008206464,0.0003372765,0.00004659154,0.000009202038,0.0003045355,0.0004994493,0.00001190281],"category_scores_gemma":[0.00009691233,0.0002866032,0.000576572,0.0002673812,0.00008243691,0.00001598138,0.0001444938,0.000394279,0.000006520073],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003866569,"about_ca_system_score_gemma":0.0004860169,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008575,"about_ca_topic_score_gemma":0.00004336932,"domain_scores_codex":[0.9979207,0.0004255614,0.0008242936,0.0002461507,0.000293923,0.0002893685],"domain_scores_gemma":[0.9979746,0.0000115573,0.001301697,0.0002969564,0.0002949807,0.0001202138],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001795021,0.004566752,0.004311261,0.03440231,0.007412979,0.0123791,0.0007162969,0.0004034795,0.16964,0.002722398,0.001756117,0.7598943],"study_design_scores_gemma":[0.009598448,0.006304667,0.004502275,0.0248533,0.01164115,0.06230878,0.0004895375,0.0000547582,0.01898145,0.002309946,0.8547821,0.004173606],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.008711105,0.9778332,0.01222577,0.000004797253,0.0003251896,0.0006981784,0.00009642951,0.000001994169,0.0001034036],"genre_scores_gemma":[0.2119984,0.7852091,0.002081708,0.00001463612,0.0004332189,0.00002981496,0.0001232585,0.00004846418,0.00006143736],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.853026,"threshold_uncertainty_score":0.9999586,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02679790903585018,"score_gpt":0.2915775089633639,"score_spread":0.2647795999275138,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}