{"id":"W2004237456","doi":"10.1016/j.copbio.2005.04.002","title":"The evolution of IncP catabolic plasmids","year":2005,"lang":"en","type":"review","venue":"Current Opinion in Biotechnology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":110,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Plasmid; Horizontal gene transfer; Biology; Genetics; Genome; Transposition (logic); Gene; Homologous recombination; Computational biology; Transposable element","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008941163,0.001046641,0.001482593,0.001247277,0.0002771359,0.00197236,0.001900079,0.002511458,0.001374279],"category_scores_gemma":[0.0009975657,0.0004460308,0.0003188985,0.002682224,0.001293964,0.002252372,0.0008581378,0.002227491,0.001719712],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001366816,"about_ca_system_score_gemma":0.001085687,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009614863,"about_ca_topic_score_gemma":0.001081388,"domain_scores_codex":[0.9996589,0.00003480589,0.00003349082,0.0001056928,0.0001301638,0.00003692587],"domain_scores_gemma":[0.9993212,0.0002906223,0.0001225895,0.00003500254,0.0001668908,0.00006373011],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001242853,0.00003361452,0.0003255371,0.004754565,0.00003010297,0.0005581928,0.00006613309,0.0008899002,0.02210967,0.007662149,0.007175812,0.9562701],"study_design_scores_gemma":[0.00003714791,0.0001689556,0.001963432,0.001252599,0.00009232046,0.003112625,0.0001518158,0.0004750168,0.0149801,0.005684296,0.9720347,0.00004705466],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001899903,0.9919618,0.002331522,0.001104785,0.0005869174,0.000008119797,0.00003322116,0.00003645077,0.002037274],"genre_scores_gemma":[0.005272839,0.9904864,0.001622714,0.0005730382,0.0004862807,0.00001345796,0.0001057545,0.000007603072,0.001431827],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.002511458,"threshold_uncertainty_score":0.009916961,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04330040372449569,"score_gpt":0.3506300006232798,"score_spread":0.3073295968987841,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}