{"id":"W2004289411","doi":"10.1007/s00125-012-2797-5","title":"Identification and analysis of murine pancreatic islet enhancers","year":2012,"lang":"en","type":"article","venue":"Diabetologia","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":false,"ca_institutions":"BC Cancer Agency; Simon Fraser University; University of British Columbia; Canada's Michael Smith Genome Sciences Centre; Child and Family Research Institute; BC Children's Hospital; Sunny Hill Health Centre for Children","funders":"Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Child and Family Research Institute; Genome British Columbia; Canadian Institutes of Health Research; Genome Canada; Canada's Michael Smith Genome Sciences Centre; National Human Genome Research Institute; Michael Smith Health Research BC","keywords":"Enhancer; PDX1; Biology; FOXA2; Islet; Enhancer RNAs; Epigenetics; Pancreatic islets; Genetics; Gene; Cell biology; Gene expression; Transcription factor; Endocrinology; Insulin","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002360928,0.00008067122,0.0004031251,0.0002426085,0.00002431886,0.000005007456,0.00002807949,0.00005759449,0.0003571969],"category_scores_gemma":[0.0003027623,0.00006483527,0.00007724825,0.0005253723,0.00008788896,0.00007120572,0.00001541333,0.00004889134,0.00002535181],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002078435,"about_ca_system_score_gemma":0.00001140238,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001375153,"about_ca_topic_score_gemma":4.22786e-7,"domain_scores_codex":[0.9993253,0.00003188686,0.0002309678,0.0001230471,0.0001134176,0.0001753458],"domain_scores_gemma":[0.9993938,0.0001308289,0.0001054177,0.0002158752,0.00005534001,0.00009870114],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00002238251,0.00009057167,0.906074,0.00006564226,0.0007538978,3.540488e-7,0.0001553296,0.000001491703,0.09013649,0.0005253055,0.000326514,0.001848022],"study_design_scores_gemma":[0.000320782,0.00005093078,0.9155726,0.00001710408,0.002538819,0.00000111796,0.0001070584,0.0006046547,0.08048275,0.00002477679,0.0002169841,0.00006240537],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995508,0.001293732,0.0004011262,0.0001013912,0.0000939181,0.0001091313,0.00001022649,0.00003507404,0.002447457],"genre_scores_gemma":[0.9987284,0.0001014727,0.000296097,0.0001757841,0.00003606551,0.00001798096,0.00006956455,0.000005358592,0.0005693102],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009653739,"threshold_uncertainty_score":0.3911056,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01484993239526434,"score_gpt":0.2726880704010087,"score_spread":0.2578381380057443,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}